Click here to switch to the map view.

The map label for this gene is ykuN

Identifier: 16078479

GI number: 16078479

Start: 1487038

End: 1487514

Strand: Direct

Name: ykuN

Synonym: BSU14150

Alternate gene names: 16078479

Gene position: 1487038-1487514 (Clockwise)

Preceding gene: 16078478

Following gene: 16078480

Centisome position: 35.27

GC content: 41.72

Gene sequence:

>477_bases
ATGGCTAAAGCCTTGATTACATATGCCAGCATGTCAGGAAATACAGAAGACATTGCCTTCATAATAAAAGATACGCTTCA
GGAATATGAGTTGGATATCGATTGTGTCGAGATAAATGATATGGATGCGTCTTGTTTAACCTCCTATGATTATGTACTGA
TTGGCACCTATACATGGGGGGACGGCGATTTGCCCTACGAAGCGGAGGATTTTTTCGAAGAGGTCAAACAGATTCAGCTT
AATGGTTTAAAAACAGCCTGCTTCGGGTCTGGCGATTATTCTTATCCAAAGTTTTGCGAAGCGGTGAATTTGTTCAATGT
CATGCTGCAAGAGGCGGGAGCTGCTGTTTACCAGGAAACACTAAAAATTGAATTAGCGCCTGAAACAGATGAAGATGTGG
AAAGCTGCCGAGCGTTTGCGAGAGGTTTTCTTGCATGGGCAGATTATATGAACAAGGAAAAAATCCATGTTTCATAA

Upstream 100 bases:

>100_bases
TGCTGTCTTTTTTTTATTTATCTGTTGACAATGAAAATCATTATCATTTAAAGTGATACATATGATATTGAAAATCATTA
TCAACTAATGGGGTGATAAC

Downstream 100 bases:

>100_bases
AGGGGCAACCGCTGTTACGGCATCGGCGTTTTCTGGATATTTTGTGGCGGTACAAAGAGAAGGCATTTTTCATTACTCTT
TGGAGCAGGGCTGGAGAAAG

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAKALITYASMSGNTEDIAFIIKDTLQEYELDIDCVEINDMDASCLTSYDYVLIGTYTWGDGDLPYEAEDFFEEVKQIQL
NGLKTACFGSGDYSYPKFCEAVNLFNVMLQEAGAAVYQETLKIELAPETDEDVESCRAFARGFLAWADYMNKEKIHVS

Sequences:

>Translated_158_residues
MAKALITYASMSGNTEDIAFIIKDTLQEYELDIDCVEINDMDASCLTSYDYVLIGTYTWGDGDLPYEAEDFFEEVKQIQL
NGLKTACFGSGDYSYPKFCEAVNLFNVMLQEAGAAVYQETLKIELAPETDEDVESCRAFARGFLAWADYMNKEKIHVS
>Mature_157_residues
AKALITYASMSGNTEDIAFIIKDTLQEYELDIDCVEINDMDASCLTSYDYVLIGTYTWGDGDLPYEAEDFFEEVKQIQLN
GLKTACFGSGDYSYPKFCEAVNLFNVMLQEAGAAVYQETLKIELAPETDEDVESCRAFARGFLAWADYMNKEKIHVS

Specific function: Low-potential electron donor to a number of redox enzymes (Potential)

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain

Homologues:

None

Paralogues:

None

Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): FLAV_BACSU (O34737)

Other databases:

- EMBL:   AJ222587
- EMBL:   AL009126
- PIR:   C69866
- RefSeq:   NP_389298.1
- ProteinModelPortal:   O34737
- SMR:   O34737
- EnsemblBacteria:   EBBACT00000000146
- GeneID:   939194
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14150
- NMPDR:   fig|224308.1.peg.1417
- GenoList:   BSU14150
- GeneTree:   EBGT00050000001045
- HOGENOM:   HBG686708
- OMA:   ATKGADS
- PhylomeDB:   O34737
- ProtClustDB:   PRK06703
- BioCyc:   BSUB:BSU14150-MONOMER
- GO:   GO:0006810
- InterPro:   IPR010087
- InterPro:   IPR001094
- InterPro:   IPR008254
- PRINTS:   PR00369
- TIGRFAMs:   TIGR01753

Pfam domain/function: PF00258 Flavodoxin_1

EC number: NA

Molecular weight: Translated: 17793; Mature: 17662

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: PS00201 FLAVODOXIN; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKALITYASMSGNTEDIAFIIKDTLQEYELDIDCVEINDMDASCLTSYDYVLIGTYTWG
CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEEEECC
DGDLPYEAEDFFEEVKQIQLNGLKTACFGSGDYSYPKFCEAVNLFNVMLQEAGAAVYQET
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
LKIELAPETDEDVESCRAFARGFLAWADYMNKEKIHVS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
AKALITYASMSGNTEDIAFIIKDTLQEYELDIDCVEINDMDASCLTSYDYVLIGTYTWG
CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEEEECC
DGDLPYEAEDFFEEVKQIQLNGLKTACFGSGDYSYPKFCEAVNLFNVMLQEAGAAVYQET
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
LKIELAPETDEDVESCRAFARGFLAWADYMNKEKIHVS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377