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The map label for this gene is ykvN

Identifier: 16078440

GI number: 16078440

Start: 1442347

End: 1442703

Strand: Reverse

Name: ykvN

Synonym: BSU13760

Alternate gene names: 16078440

Gene position: 1442703-1442347 (Counterclockwise)

Preceding gene: 255767319

Following gene: 16078434

Centisome position: 34.22

GC content: 38.66

Gene sequence:

>357_bases
ATGAAAAAATTTAGCTGTGGGTTTGAAGTGACAAAGGAAGTTATTGGCGGAAAATGGAAAGGCCTTGTATTATACTTTTT
AATGAATGGACCAAAGAGAACGAGTGAATTAAAGCGCATTATCCCAAATATAACTCAGAAAATGCTGATTCAAACACTTA
GAGAGCTTGAAGCCAGTGGACTTGTGAGCAGAAAGATGTATAATCAAGTACCGCCGAAGGTTGAATATTCATCCACTGAA
CTTGGAGAATCTCTTAAACCTATCTTGCAGGAGCTCTGTCAATGGGGAGGCTATTATGCGGAGCAAGAGTATGCAGAAGG
TGAATATGAAATTGTACAACCAGAACAACTAAGTTAG

Upstream 100 bases:

>100_bases
CAAGATATAGTATCCTTCAGTAAGCACATTATCGGAAGTACCCACTTTTTTGTGATATAGTAACTAAAAAGTAATAAATG
TGGAATGGAGAGCTTTAGAC

Downstream 100 bases:

>100_bases
GATTGATGTAGCTGCTGAAGTAAATGCTAAACAACTTCAATACCATCACCTAACAGATGAAGAACAGTCAGAAATAAATG
AGATATTCAATTTTGAAAGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRIIPNITQKMLIQTLRELEASGLVSRKMYNQVPPKVEYSSTE
LGESLKPILQELCQWGGYYAEQEYAEGEYEIVQPEQLS

Sequences:

>Translated_118_residues
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRIIPNITQKMLIQTLRELEASGLVSRKMYNQVPPKVEYSSTE
LGESLKPILQELCQWGGYYAEQEYAEGEYEIVQPEQLS
>Mature_118_residues
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRIIPNITQKMLIQTLRELEASGLVSRKMYNQVPPKVEYSSTE
LGESLKPILQELCQWGGYYAEQEYAEGEYEIVQPEQLS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI87082391, Length=87, Percent_Identity=42.5287356321839, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKVN_BACSU (O31679)

Other databases:

- EMBL:   AL009126
- PIR:   E69868
- RefSeq:   NP_389259.1
- ProteinModelPortal:   O31679
- SMR:   O31679
- EnsemblBacteria:   EBBACT00000002279
- GeneID:   939274
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13760
- NMPDR:   fig|224308.1.peg.1378
- GenoList:   BSU13760
- GeneTree:   EBGT00070000031789
- HOGENOM:   HBG752497
- OMA:   EYSSTEL
- ProtClustDB:   CLSK887200
- BioCyc:   BSUB:BSU13760-MONOMER
- GO:   GO:0006350
- InterPro:   IPR002577
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF01638 DUF24

EC number: NA

Molecular weight: Translated: 13570; Mature: 13570

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRIIPNITQKMLIQTLRELEASG
CCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSRKMYNQVPPKVEYSSTELGESLKPILQELCQWGGYYAEQEYAEGEYEIVQPEQLS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCC
>Mature Secondary Structure
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRIIPNITQKMLIQTLRELEASG
CCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSRKMYNQVPPKVEYSSTELGESLKPILQELCQWGGYYAEQEYAEGEYEIVQPEQLS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377