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The map label for this gene is ykoY

Identifier: 16078408

GI number: 16078408

Start: 1410654

End: 1411628

Strand: Direct

Name: ykoY

Synonym: BSU13440

Alternate gene names: 16078408

Gene position: 1410654-1411628 (Clockwise)

Preceding gene: 16078407

Following gene: 16078409

Centisome position: 33.46

GC content: 45.64

Gene sequence:

>975_bases
ATGTATTCCGGAAACAAAGTCGTCATTTCATGGATTGTATCCATCGGCTTTGTTGGCATGCCTGAATTCATGTCTAGCAA
GACCTTTGCCTTATGTCGGCAAAGGTCTTTTTTGCATGGTCCGGCCGGCATAAGATCGGATGAAGAGAAAGAAAACAACT
TTTTTGGGAGGGTATCATTTATGGATGCAGCATTATTATTAGAGTATGGTTGGGTTCTTCTCGTCTTGATCGGGCTGGAA
GGGATTTTAGCCGCCGATAACGCGCTGGTTATGGCGGTAATGGTAAAACATTTGCCGGAGGAAAAAAGAAAAAAAGCGTT
ATTTTATGGATTGGCAGGGGCTTTTGTTCTGCGATTTGGCTCTTTATTTGCAATTTCTTTCTTGGTCAACGTATGGCAGG
TTCAAGCGATTGGCGCGATCTATTTGCTGTATATCTCAGCAAGCCACTTATTGAAAAGATATGTATTTAAGAAAGAAGAC
ACACATAAAGAGACGAAGCAAAGCGGTTTTTGGCCGACTGTTTTAAAAGTTGAACTGGCAGATATCGCGTTTGCTGTTGA
TTCCATCTTAGCAGCAGTAGCGCTGGCGGTTACACTTCCTGGGACATCACTCCCGAAGATCGGCGGACTTGACGGAGGAC
AATTTCTCGTCATTTTGGCCGGCGGTATCATCGGACTGGTGATCATGCGGTTTGCGGCTTCCATGTTTGTGAAGTTATTA
AAGGAACGTCCAAGCCTAGAAACAGCAGCCTTTGTGATTGTCGGCTGGGTCGGAGTGAAGCTTGCTTTATATACGCTTGC
CCATCGCGACATAGCGGTTGTTTCTGAGCACTTTATCCATTCTGGAACATGGAAGCTGATATTCTGGGGTGTCTTAGCAG
CAATCGCGGTTTGCGGCTGGTTTATGTCAGGTGGGAAAAAACAGCCGGAGGGTGCACAAAACGAACAAAAAAACAGCACC
CGTGAACGGGCGTAA

Upstream 100 bases:

>100_bases
GTATTTTTGAAAAATAAACGTTGACAAATCACTGCGCTGCGCATATTATTGACGTATAAAATCATATTTCTTGAAATCCC
AAAGGGGAGTAGCGTCCGGA

Downstream 100 bases:

>100_bases
TCTGAAAGACTCTGCTTAAAAGCAGAGTCTTTTTGTGTTTGAAGCGTTTTCATAAGCGAAATAAAATAACATTTTTATAA
CATCTTTGTTACAAAAAACA

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MYSGNKVVISWIVSIGFVGMPEFMSSKTFALCRQRSFLHGPAGIRSDEEKENNFFGRVSFMDAALLLEYGWVLLVLIGLE
GILAADNALVMAVMVKHLPEEKRKKALFYGLAGAFVLRFGSLFAISFLVNVWQVQAIGAIYLLYISASHLLKRYVFKKED
THKETKQSGFWPTVLKVELADIAFAVDSILAAVALAVTLPGTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLL
KERPSLETAAFVIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGWFMSGGKKQPEGAQNEQKNST
RERA

Sequences:

>Translated_324_residues
MYSGNKVVISWIVSIGFVGMPEFMSSKTFALCRQRSFLHGPAGIRSDEEKENNFFGRVSFMDAALLLEYGWVLLVLIGLE
GILAADNALVMAVMVKHLPEEKRKKALFYGLAGAFVLRFGSLFAISFLVNVWQVQAIGAIYLLYISASHLLKRYVFKKED
THKETKQSGFWPTVLKVELADIAFAVDSILAAVALAVTLPGTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLL
KERPSLETAAFVIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGWFMSGGKKQPEGAQNEQKNST
RERA
>Mature_324_residues
MYSGNKVVISWIVSIGFVGMPEFMSSKTFALCRQRSFLHGPAGIRSDEEKENNFFGRVSFMDAALLLEYGWVLLVLIGLE
GILAADNALVMAVMVKHLPEEKRKKALFYGLAGAFVLRFGSLFAISFLVNVWQVQAIGAIYLLYISASHLLKRYVFKKED
THKETKQSGFWPTVLKVELADIAFAVDSILAAVALAVTLPGTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLL
KERPSLETAAFVIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGWFMSGGKKQPEGAQNEQKNST
RERA

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family

Homologues:

Organism=Escherichia coli, GI1788119, Length=204, Percent_Identity=23.5294117647059, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKOY_BACSU (O34997)

Other databases:

- EMBL:   AL009126
- PIR:   C69861
- RefSeq:   NP_389227.1
- ProteinModelPortal:   O34997
- EnsemblBacteria:   EBBACT00000001190
- GeneID:   939368
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13440
- NMPDR:   fig|224308.1.peg.1346
- GenoList:   BSU13440
- GeneTree:   EBGT00050000001198
- HOGENOM:   HBG729440
- OMA:   LVIMRFA
- ProtClustDB:   CLSK873342
- BioCyc:   BSUB:BSU13440-MONOMER
- InterPro:   IPR022493
- InterPro:   IPR005496
- TIGRFAMs:   TIGR03716

Pfam domain/function: PF03741 TerC

EC number: NA

Molecular weight: Translated: 35532; Mature: 35532

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd9bd5e4)-; HASH(0xe897e7c)-; HASH(0xe808ccc)-; HASH(0xdfd5188)-; HASH(0xea90824)-; HASH(0xe7aeee0)-; HASH(0xb350940)-; HASH(0xe38d8fc)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSGNKVVISWIVSIGFVGMPEFMSSKTFALCRQRSFLHGPAGIRSDEEKENNFFGRVSF
CCCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHH
MDAALLLEYGWVLLVLIGLEGILAADNALVMAVMVKHLPEEKRKKALFYGLAGAFVLRFG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SLFAISFLVNVWQVQAIGAIYLLYISASHLLKRYVFKKEDTHKETKQSGFWPTVLKVELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH
DIAFAVDSILAAVALAVTLPGTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
KERPSLETAAFVIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGW
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FMSGGKKQPEGAQNEQKNSTRERA
HHCCCCCCCCCCCCHHHCCCCCCH
>Mature Secondary Structure
MYSGNKVVISWIVSIGFVGMPEFMSSKTFALCRQRSFLHGPAGIRSDEEKENNFFGRVSF
CCCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHH
MDAALLLEYGWVLLVLIGLEGILAADNALVMAVMVKHLPEEKRKKALFYGLAGAFVLRFG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SLFAISFLVNVWQVQAIGAIYLLYISASHLLKRYVFKKEDTHKETKQSGFWPTVLKVELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH
DIAFAVDSILAAVALAVTLPGTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
KERPSLETAAFVIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGW
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FMSGGKKQPEGAQNEQKNSTRERA
HHCCCCCCCCCCCCHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377