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The map label for this gene is ykkB

Identifier: 16078373

GI number: 16078373

Start: 1375777

End: 1376295

Strand: Direct

Name: ykkB

Synonym: BSU13080

Alternate gene names: 16078373

Gene position: 1375777-1376295 (Clockwise)

Preceding gene: 16078372

Following gene: 16078374

Centisome position: 32.64

GC content: 47.78

Gene sequence:

>519_bases
ATGAACGCTAAAACGAAGCTTGTGACTGATCGAATTCGTTTGCGCTGTATGGAAGATCGGGATCAAGCCACTTTGTTTGG
GCTGCTTTTTAATGATCCTGACGTCATGACATATTATTCCGGTTTAAAAGATAAGAGGCAAACCCGCGAGTGGGTCAATT
GGAACCAACGAAATGAAAAAGGGTACGGCGTTAGTCTGTGGATCGCCGAAGATAAGCGGACAGGGGAGTTTTTGGGGCAA
TGCGGCATCGTTCCCCAGCAGATCGAAAATCAAACCGTAATGGAAATTGGCTATATGTTTGCCCGCCGCCACTGGGGGAA
CGGCTATGCGCAAGAAGCGGCTCGGGCCTGTCTGGACTATGGCTTTAACGAGCGGCAGTTCGGCAAAATGGCGGCTTTGA
TTGATCCGGGTAACAAAGCGTCCATACGGGTAGCGGAGAAAATCGGCATGCATTACAGCAAAACGATCAGAAAATGGAAT
AAACCGATCGCGGTATATGAAAGAAAATCTTACAATTGA

Upstream 100 bases:

>100_bases
ACGATACGATGGGGAATTTGGCATATGGCAGATCATAACCGCTATCATCAGGCACATATTGAAGCTCTCAAAAAAGAATG
GAAGCAGGATGTGGCGAAGT

Downstream 100 bases:

>100_bases
AAGATAGAGCTGAGTTTAGTATCATGATATCATGTAAAGTTTTCTAGGGTTCCGCATGTCAATTGACATGGACTGGTCCG
AGAGAAAACACATACGCGTA

Product: N-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTREWVNWNQRNEKGYGVSLWIAEDKRTGEFLGQ
CGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDYGFNERQFGKMAALIDPGNKASIRVAEKIGMHYSKTIRKWN
KPIAVYERKSYN

Sequences:

>Translated_172_residues
MNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTREWVNWNQRNEKGYGVSLWIAEDKRTGEFLGQ
CGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDYGFNERQFGKMAALIDPGNKASIRVAEKIGMHYSKTIRKWN
KPIAVYERKSYN
>Mature_172_residues
MNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTREWVNWNQRNEKGYGVSLWIAEDKRTGEFLGQ
CGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDYGFNERQFGKMAALIDPGNKASIRVAEKIGMHYSKTIRKWN
KPIAVYERKSYN

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKKB_BACSU (P49855)

Other databases:

- EMBL:   D78189
- EMBL:   AJ002571
- EMBL:   AL009126
- PIR:   H69856
- RefSeq:   NP_389191.1
- ProteinModelPortal:   P49855
- SMR:   P49855
- EnsemblBacteria:   EBBACT00000002887
- GeneID:   939859
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13080
- NMPDR:   fig|224308.1.peg.1310
- GenoList:   BSU13080
- GeneTree:   EBGT00070000031755
- HOGENOM:   HBG742014
- OMA:   VEIGYHI
- ProtClustDB:   CLSK887162
- BioCyc:   BSUB:BSU13080-MONOMER
- InterPro:   IPR000182
- InterPro:   IPR016181
- Gene3D:   G3DSA:3.40.630.30

Pfam domain/function: PF00583 Acetyltransf_1; SSF55729 Acyl_CoA_acyltransferase

EC number: NA

Molecular weight: Translated: 20088; Mature: 20088

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS51186 GNAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTREWVNWNQRNEK
CCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHCCCCCCCCC
GYGVSLWIAEDKRTGEFLGQCGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDY
CCCEEEEEECCCCCHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GFNERQFGKMAALIDPGNKASIRVAEKIGMHYSKTIRKWNKPIAVYERKSYN
CCCCCHHCCEEEEECCCCCCEEEHHHHHCCHHHHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure
MNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTREWVNWNQRNEK
CCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHCCCCCCCCC
GYGVSLWIAEDKRTGEFLGQCGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDY
CCCEEEEEECCCCCHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GFNERQFGKMAALIDPGNKASIRVAEKIGMHYSKTIRKWNKPIAVYERKSYN
CCCCCHHCCEEEEECCCCCCEEEHHHHHCCHHHHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377