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The map label for this gene is ykkA

Identifier: 16078372

GI number: 16078372

Start: 1375260

End: 1375787

Strand: Direct

Name: ykkA

Synonym: BSU13070

Alternate gene names: 16078372

Gene position: 1375260-1375787 (Clockwise)

Preceding gene: 16078371

Following gene: 16078373

Centisome position: 32.62

GC content: 46.59

Gene sequence:

>528_bases
ATGAAGGACTTATCCATAAGAAACGACATGGCGCCAACGGTCAGTTTGCTGTATTCCGCAGTGGAAGAAAACAGTCTCCG
TCTGGCTTCCATCGTAAGCCATATGACACACAGTGAACTTTACTATAAGGGGCGCTGCCAAACAAAAAACAGCACGGCTC
AGCTTTTGCACCATATCACAAATGTTGATATCAGATGGGTCTGGCGTATCAAGGAAAATCGGATCCCGGACCATATTGAA
CAGGCATACGGCCCGATGACAGATGAAAGCGGACGGCTGCCTGAACCGGTGAATCAGCCAGACTTAGATGAACTCCTGAA
AAGACATCAGCATGTAGTAGAGAAGCTGAAATCGGTATGCTTCACTTTAACTGAAAATGCTTTGAACCAGCCGCTTTCCT
TCGAAGGTGACACCGCGACGATACGATGGGGAATTTGGCATATGGCAGATCATAACCGCTATCATCAGGCACATATTGAA
GCTCTCAAAAAAGAATGGAAGCAGGATGTGGCGAAGTATGAACGCTAA

Upstream 100 bases:

>100_bases
AACAATTAAGATGGCTCTCTCTTGTAATGAGAGCTTTTTTCTTTTTTAAAGGGAATTTTTGTTTGGTGTCAAATGTACCT
AGTTAGGAGGGGAACTGAAC

Downstream 100 bases:

>100_bases
AACGAAGCTTGTGACTGATCGAATTCGTTTGCGCTGTATGGAAGATCGGGATCAAGCCACTTTGTTTGGGCTGCTTTTTA
ATGATCCTGACGTCATGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKDLSIRNDMAPTVSLLYSAVEENSLRLASIVSHMTHSELYYKGRCQTKNSTAQLLHHITNVDIRWVWRIKENRIPDHIE
QAYGPMTDESGRLPEPVNQPDLDELLKRHQHVVEKLKSVCFTLTENALNQPLSFEGDTATIRWGIWHMADHNRYHQAHIE
ALKKEWKQDVAKYER

Sequences:

>Translated_175_residues
MKDLSIRNDMAPTVSLLYSAVEENSLRLASIVSHMTHSELYYKGRCQTKNSTAQLLHHITNVDIRWVWRIKENRIPDHIE
QAYGPMTDESGRLPEPVNQPDLDELLKRHQHVVEKLKSVCFTLTENALNQPLSFEGDTATIRWGIWHMADHNRYHQAHIE
ALKKEWKQDVAKYER
>Mature_175_residues
MKDLSIRNDMAPTVSLLYSAVEENSLRLASIVSHMTHSELYYKGRCQTKNSTAQLLHHITNVDIRWVWRIKENRIPDHIE
QAYGPMTDESGRLPEPVNQPDLDELLKRHQHVVEKLKSVCFTLTENALNQPLSFEGDTATIRWGIWHMADHNRYHQAHIE
ALKKEWKQDVAKYER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKKA_BACSU (P49854)

Other databases:

- EMBL:   D78189
- EMBL:   AJ002571
- EMBL:   AL009126
- PIR:   G69856
- RefSeq:   NP_389190.1
- ProteinModelPortal:   P49854
- EnsemblBacteria:   EBBACT00000001695
- GeneID:   937079
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13070
- NMPDR:   fig|224308.1.peg.1309
- GenoList:   BSU13070
- GeneTree:   EBGT00050000001248
- HOGENOM:   HBG341060
- OMA:   GSENNEN
- ProtClustDB:   CLSK887161
- BioCyc:   BSUB:BSU13070-MONOMER
- InterPro:   IPR007061

Pfam domain/function: PF04978 DUF664

EC number: NA

Molecular weight: Translated: 20494; Mature: 20494

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLSIRNDMAPTVSLLYSAVEENSLRLASIVSHMTHSELYYKGRCQTKNSTAQLLHHIT
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
NVDIRWVWRIKENRIPDHIEQAYGPMTDESGRLPEPVNQPDLDELLKRHQHVVEKLKSVC
CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FTLTENALNQPLSFEGDTATIRWGIWHMADHNRYHQAHIEALKKEWKQDVAKYER
HHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDLSIRNDMAPTVSLLYSAVEENSLRLASIVSHMTHSELYYKGRCQTKNSTAQLLHHIT
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
NVDIRWVWRIKENRIPDHIEQAYGPMTDESGRLPEPVNQPDLDELLKRHQHVVEKLKSVC
CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FTLTENALNQPLSFEGDTATIRWGIWHMADHNRYHQAHIEALKKEWKQDVAKYER
HHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377