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The map label for this gene is ykgB

Identifier: 16078366

GI number: 16078366

Start: 1369876

End: 1370925

Strand: Reverse

Name: ykgB

Synonym: BSU13010

Alternate gene names: 16078366

Gene position: 1370925-1369876 (Counterclockwise)

Preceding gene: 255767306

Following gene: 255767300

Centisome position: 32.52

GC content: 45.62

Gene sequence:

>1050_bases
ATGACAAAATACATAGGATATGTGGGAACATATACAAAAGGCGGAAGCGAAGGAATTTATTCATTTGAGCTTGATACTGA
GAAAAAAGCACTCAGCGAGCCAAAGCTGGCCGCTAAGCTGGGCAACCCGACATATGTGGCGACGAATAAAAACAACACCA
TCCTTTATTCCATCGAAAAAGCAGACGGCCAAGGCGGAGTTGCTGCCTATCAAATCGATAAAAACAGCGGCGAATTGACA
TTTCTGAATCATCAGTTAATTGATGGCCCTTCGCCATGCCACGTAAGCGTTGATGATCAAAATCAATTCGTACTGACTGC
CAATTATCACAGCGGGAAGGTACACGTTTTTCCGGTTCAGGAAGACGGCAGCTTGCAATCACCTGTTTCAGAGGCCGCTC
ACACAGGAAAAGGGCCGCACGAAAGACAAGAAAAACCGCATACACACTACGCGGGGTTCACACCTGAACACAATTATGTG
GTAGCGGTTGATTTAGGTATAGATAAGCTCTACACCTATAAGCTTAAAGACGGTGTGTTGACTGAATCCGGAAGCCATTC
CTTCGCTCCCGGTGCAGGACCTCGCCATATCGCTTTTCATCCGAAAGAAAAATACGCTTATGTCATGACAGAATTAAGCA
ATGAAGTGATTGCGCTTGAATACAACCCGACAGCCGGCGAATTTAGAGAAATCCAAGTCGTTTCTGCCATCCCTGATGAT
TTTACAGATAACAGCCAGGGAAGCGCAATACATGTCACGCAGGACGGACGTTTTGTTTATGTCGCAAACCGCGGCCATGA
CAGTATCGCCGTATTTGAAGTGAATCAATATTCAGGAGAGCTGGCTTTCGTAGAAAGAGTGTCGACAGAAGGAAACTGGC
CTCGTGACTTTGTATTTGACCCAACGGAAGGGTTCCTCGTTGCTTCAAATGAAGAAACAGGCAACCTTGTCTTGTTTGAA
AGAGACAAAGAAACCGGCCGATTGACACTCCTCCCATCAACGGTTTCTGTCCCTTACCCGGTTTGTGTAAAGTTTTTACA
TCAAGTATAA

Upstream 100 bases:

>100_bases
GAGGCGAATGAAGAATCTTCCCCTTTTTCATGTTTTGAACAGCTTATTTTATCAAGATACGTTAATATAGAGGTGACATC
ATTTTTAAGGGGGAAATCGC

Downstream 100 bases:

>100_bases
ACAAATGGAGTGGCTCTAGTAAAAAGGAGCCACTCTTTTTATTTATCTTACTTTTTCCTTCGTTTCAGCATTTCGATACA
AATGGCAAGCGACAAAACGG

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTKYIGYVGTYTKGGSEGIYSFELDTEKKALSEPKLAAKLGNPTYVATNKNNTILYSIEKADGQGGVAAYQIDKNSGELT
FLNHQLIDGPSPCHVSVDDQNQFVLTANYHSGKVHVFPVQEDGSLQSPVSEAAHTGKGPHERQEKPHTHYAGFTPEHNYV
VAVDLGIDKLYTYKLKDGVLTESGSHSFAPGAGPRHIAFHPKEKYAYVMTELSNEVIALEYNPTAGEFREIQVVSAIPDD
FTDNSQGSAIHVTQDGRFVYVANRGHDSIAVFEVNQYSGELAFVERVSTEGNWPRDFVFDPTEGFLVASNEETGNLVLFE
RDKETGRLTLLPSTVSVPYPVCVKFLHQV

Sequences:

>Translated_349_residues
MTKYIGYVGTYTKGGSEGIYSFELDTEKKALSEPKLAAKLGNPTYVATNKNNTILYSIEKADGQGGVAAYQIDKNSGELT
FLNHQLIDGPSPCHVSVDDQNQFVLTANYHSGKVHVFPVQEDGSLQSPVSEAAHTGKGPHERQEKPHTHYAGFTPEHNYV
VAVDLGIDKLYTYKLKDGVLTESGSHSFAPGAGPRHIAFHPKEKYAYVMTELSNEVIALEYNPTAGEFREIQVVSAIPDD
FTDNSQGSAIHVTQDGRFVYVANRGHDSIAVFEVNQYSGELAFVERVSTEGNWPRDFVFDPTEGFLVASNEETGNLVLFE
RDKETGRLTLLPSTVSVPYPVCVKFLHQV
>Mature_348_residues
TKYIGYVGTYTKGGSEGIYSFELDTEKKALSEPKLAAKLGNPTYVATNKNNTILYSIEKADGQGGVAAYQIDKNSGELTF
LNHQLIDGPSPCHVSVDDQNQFVLTANYHSGKVHVFPVQEDGSLQSPVSEAAHTGKGPHERQEKPHTHYAGFTPEHNYVV
AVDLGIDKLYTYKLKDGVLTESGSHSFAPGAGPRHIAFHPKEKYAYVMTELSNEVIALEYNPTAGEFREIQVVSAIPDDF
TDNSQGSAIHVTQDGRFVYVANRGHDSIAVFEVNQYSGELAFVERVSTEGNWPRDFVFDPTEGFLVASNEETGNLVLFER
DKETGRLTLLPSTVSVPYPVCVKFLHQV

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family

Homologues:

Organism=Escherichia coli, GI1786983, Length=265, Percent_Identity=30.5660377358491, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKGB_BACSU (O34499)

Other databases:

- EMBL:   AJ002571
- EMBL:   AL009126
- PIR:   D69856
- RefSeq:   NP_389184.1
- ProteinModelPortal:   O34499
- SMR:   O34499
- EnsemblBacteria:   EBBACT00000001688
- GeneID:   937980
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13010
- NMPDR:   fig|224308.1.peg.1303
- GenoList:   BSU13010
- GeneTree:   EBGT00050000002256
- HOGENOM:   HBG741123
- OMA:   QEKPHAH
- PhylomeDB:   O34499
- ProtClustDB:   CLSK887159
- BioCyc:   BSUB:BSU13010-MONOMER
- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943
- Gene3D:   G3DSA:2.130.10.10

Pfam domain/function: PF10282 DUF2394; SSF51004 Cyt_cd1_haem_C

EC number: NA

Molecular weight: Translated: 38411; Mature: 38280

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYIGYVGTYTKGGSEGIYSFELDTEKKALSEPKLAAKLGNPTYVATNKNNTILYSIEK
CCEEEEEEEEECCCCCCCEEEEEECCCHHHHCCCCCEEECCCCEEEEECCCCEEEEEEEE
ADGQGGVAAYQIDKNSGELTFLNHQLIDGPSPCHVSVDDQNQFVLTANYHSGKVHVFPVQ
CCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEEEEEC
EDGSLQSPVSEAAHTGKGPHERQEKPHTHYAGFTPEHNYVVAVDLGIDKLYTYKLKDGVL
CCCCCCCCHHHHHHCCCCCCHHCCCCCCEECCCCCCCCEEEEEEECCCEEEEEEECCCEE
TESGSHSFAPGAGPRHIAFHPKEKYAYVMTELSNEVIALEYNPTAGEFREIQVVSAIPDD
ECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEEEECCCC
FTDNSQGSAIHVTQDGRFVYVANRGHDSIAVFEVNQYSGELAFVERVSTEGNWPRDFVFD
CCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEC
PTEGFLVASNEETGNLVLFERDKETGRLTLLPSTVSVPYPVCVKFLHQV
CCCCEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TKYIGYVGTYTKGGSEGIYSFELDTEKKALSEPKLAAKLGNPTYVATNKNNTILYSIEK
CEEEEEEEEECCCCCCCEEEEEECCCHHHHCCCCCEEECCCCEEEEECCCCEEEEEEEE
ADGQGGVAAYQIDKNSGELTFLNHQLIDGPSPCHVSVDDQNQFVLTANYHSGKVHVFPVQ
CCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEEEEEC
EDGSLQSPVSEAAHTGKGPHERQEKPHTHYAGFTPEHNYVVAVDLGIDKLYTYKLKDGVL
CCCCCCCCHHHHHHCCCCCCHHCCCCCCEECCCCCCCCEEEEEEECCCEEEEEEECCCEE
TESGSHSFAPGAGPRHIAFHPKEKYAYVMTELSNEVIALEYNPTAGEFREIQVVSAIPDD
ECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEEEECCCC
FTDNSQGSAIHVTQDGRFVYVANRGHDSIAVFEVNQYSGELAFVERVSTEGNWPRDFVFD
CCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEC
PTEGFLVASNEETGNLVLFERDKETGRLTLLPSTVSVPYPVCVKFLHQV
CCCCEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377