Click here to switch to the map view.

The map label for this gene is xhlA

Identifier: 16078344

GI number: 16078344

Start: 1346731

End: 1347000

Strand: Direct

Name: xhlA

Synonym: BSU12790

Alternate gene names: 16078344

Gene position: 1346731-1347000 (Clockwise)

Preceding gene: 255767296

Following gene: 16078345

Centisome position: 31.95

GC content: 47.41

Gene sequence:

>270_bases
ATGCAGCAAGAGGCAGACGTGAATGTGTTTCAGCAGGATTTAGCAGACATGAAAGGCGAGCACAAAGCACTTGAGCAGAG
GGTTTCCGCATTAGAACGCGTGTCTGACCGGCAAGACCAGCAAATCATGACGCTGAACGAAAAATTAAACAAAATTGAAG
AAAACACCACGTGGATTAAACGCACCATCACAGGTGCCATCATTACAGCAGTGTCTACAGGCATCATTGGCGGAGCCATC
GCCATTATGTACAGCCTGCTGCAGCATTAA

Upstream 100 bases:

>100_bases
AGTATCACCGGCGGTACTCTTTCGGTAAAAGGGACCGCGGTTTCATAATAGTCTCGGCCCTCGGAAGGGAGGTGATCTGC
ATGTGAAGGAGGAGTGAGAG

Downstream 100 bases:

>100_bases
AGGGGGATTTTTATGAACACGTTTGACAAGGGCACGGTCATCAGGACGGTGCTTCTTTTAATTGCTTTAATCAACCAGAC
CATGCTGATGCTCGGCAAAT

Product: defective prophage PBSX enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MQQEADVNVFQQDLADMKGEHKALEQRVSALERVSDRQDQQIMTLNEKLNKIEENTTWIKRTITGAIITAVSTGIIGGAI
AIMYSLLQH

Sequences:

>Translated_89_residues
MQQEADVNVFQQDLADMKGEHKALEQRVSALERVSDRQDQQIMTLNEKLNKIEENTTWIKRTITGAIITAVSTGIIGGAI
AIMYSLLQH
>Mature_89_residues
MQQEADVNVFQQDLADMKGEHKALEQRVSALERVSDRQDQQIMTLNEKLNKIEENTTWIKRTITGAIITAVSTGIIGGAI
AIMYSLLQH

Specific function: Associated with cell lysis upon induction of pbsX

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.licheniformis xpaF1 and xpaL1

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XHLA_BACSU (P39798)

Other databases:

- EMBL:   Z36941
- EMBL:   L25924
- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   G69730
- RefSeq:   NP_389162.1
- EnsemblBacteria:   EBBACT00000002792
- GeneID:   936210
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12790
- NMPDR:   fig|224308.1.peg.1281
- GenoList:   BSU12790
- GeneTree:   EBGT00050000002589
- HOGENOM:   HBG341023
- OMA:   WIKRTIT
- ProtClustDB:   CLSK887141
- BioCyc:   BSUB:BSU12790-MONOMER
- InterPro:   IPR019715

Pfam domain/function: PF10779 XhlA

EC number: NA

Molecular weight: Translated: 9998; Mature: 9998

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe84e1b4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQEADVNVFQQDLADMKGEHKALEQRVSALERVSDRQDQQIMTLNEKLNKIEENTTWIK
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTITGAIITAVSTGIIGGAIAIMYSLLQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MQQEADVNVFQQDLADMKGEHKALEQRVSALERVSDRQDQQIMTLNEKLNKIEENTTWIK
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTITGAIITAVSTGIIGGAIAIMYSLLQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921239; 9555893; 9384377