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The map label for this gene is xkdW

Identifier: 16078341

GI number: 16078341

Start: 1345305

End: 1345634

Strand: Direct

Name: xkdW

Synonym: BSU12760

Alternate gene names: 16078341

Gene position: 1345305-1345634 (Clockwise)

Preceding gene: 16078340

Following gene: 16078342

Centisome position: 31.91

GC content: 45.15

Gene sequence:

>330_bases
ATGATCTTATATGATGCCATTATGTACAAGTATCCAAACGCAGTATCGAGAAAGGATTTTGAATTGCGTAATGACGGGAA
CGGTTCATACATTGAGAAATGGAATCTCCGGGCGCCGTTGCCGACTCAGGCAGAACTCGAAACCTGGTGGGAAGAGCTGC
AAAAAAATCCGCCGTACGAGCCGCCTGATCAGGTGGAGCTTCTCGCTCAAGAATTGTCACAGGAAAAGCTGGCACGCAAG
CAGCTTGAAGAGCTGAACAAAACATTAGGGAACGAGTTGTCAGATATAAAGCTATCATTACTTTCCTTGAAAGGAGATTA
TGCTGAATGA

Upstream 100 bases:

>100_bases
ATGTAACACGATATGTTACAGATTCGAATGGAGCTCTCAATTATTTTGATGTTCTGGAGCTTGGCGGAAGAAATTACCCG
AGAGTTTAGGAGGTACCTTT

Downstream 100 bases:

>100_bases
ATTATTGGGTGCTTGCCCTCTATTATGAGTGGGCGACAACGGATATGGTGAAACAGGCTTTAGCATATGAAGACTGTTCA
ATTCAGGATCTGGCAGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MILYDAIMYKYPNAVSRKDFELRNDGNGSYIEKWNLRAPLPTQAELETWWEELQKNPPYEPPDQVELLAQELSQEKLARK
QLEELNKTLGNELSDIKLSLLSLKGDYAE

Sequences:

>Translated_109_residues
MILYDAIMYKYPNAVSRKDFELRNDGNGSYIEKWNLRAPLPTQAELETWWEELQKNPPYEPPDQVELLAQELSQEKLARK
QLEELNKTLGNELSDIKLSLLSLKGDYAE
>Mature_109_residues
MILYDAIMYKYPNAVSRKDFELRNDGNGSYIEKWNLRAPLPTQAELETWWEELQKNPPYEPPDQVELLAQELSQEKLARK
QLEELNKTLGNELSDIKLSLLSLKGDYAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqcC

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDW_BACSU (P54342)

Other databases:

- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   F69733
- RefSeq:   NP_389159.1
- PDB:   2HG7
- PDBsum:   2HG7
- ProteinModelPortal:   P54342
- SMR:   P54342
- EnsemblBacteria:   EBBACT00000001332
- GeneID:   936237
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12760
- NMPDR:   fig|224308.1.peg.1278
- GenoList:   BSU12760
- GeneTree:   EBGT00050000006618
- HOGENOM:   HBG345190
- OMA:   TWRISAP
- ProtClustDB:   CLSK887138
- BioCyc:   BSUB:BSU12760-MONOMER
- InterPro:   IPR019094

Pfam domain/function: PF09636 XkdW

EC number: NA

Molecular weight: Translated: 12728; Mature: 12728

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILYDAIMYKYPNAVSRKDFELRNDGNGSYIEKWNLRAPLPTQAELETWWEELQKNPPYE
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCC
PPDQVELLAQELSQEKLARKQLEELNKTLGNELSDIKLSLLSLKGDYAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MILYDAIMYKYPNAVSRKDFELRNDGNGSYIEKWNLRAPLPTQAELETWWEELQKNPPYE
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCC
PPDQVELLAQELSQEKLARKQLEELNKTLGNELSDIKLSLLSLKGDYAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377