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The map label for this gene is xkdV

Identifier: 16078340

GI number: 16078340

Start: 1343230

End: 1345293

Strand: Direct

Name: xkdV

Synonym: BSU12750

Alternate gene names: 16078340

Gene position: 1343230-1345293 (Clockwise)

Preceding gene: 255767295

Following gene: 16078341

Centisome position: 31.86

GC content: 38.18

Gene sequence:

>2064_bases
ATGGCATACGAAGAAAAAACAGACTGGCTTCCGGACGACCCAATCAACGAAGATGACGTCAACCGCTGGGAAAAAGGAAT
AAAAGACGCCCACACCGACCTGGCTGCCCACAAAAACGACATGAACAACCCCCACAACACAACAAAGGCGCAAATCGGGC
TGGGGAATGTGGATAATGTGCAGCAGGCTTCAAAGACGGAATTTAATGAACATAATCATGATTCAACCCGGCATATTACA
TCAGTAGAACGTGATGAATGGAATGCGAAGGAAACACCTGCCGGAGCCCAGTATAAGGCAGATCAAGCTGAAGCAAACGC
CAAAGCATATACAGACAATTTTGCTGCACGAAGAGATAATCCTAACCAAGTAACAAAAGCACAGGTTGGACTTGGGAATG
TCGAAAATGTGAAACAAGCCTCACTAGCAGATTTTGATGCTCATTTAAGCAATTCTAAAGTTCATGTATCTGAAGGGGAA
AGAAACAAATGGAATGCTGCCCAACTAATTAAACTTACTGGAGACGACGGTAAAAGAATACAACTCCAAGACGGTACAGA
TATTCTTACATTATCTTCTGGATTTTATTGTGCAGTTGGTCAGTCAGTTGTAAACAACCCGGTGGAAGGCGATGCAGCTT
GGTATAACTACGATATTGTAGAAGGCGGTTCAGGAAGGAAAACAATAGTAGCTTACCAAAGTTGGGGAAGTATGATGTGG
ATTGGAATGGTTCACACTGATGGAGAATTTAGAGGATGGAAACAAATTGCAACAACAGATTTTATAGATAGAGTTCAAAC
AGAATTAGATCTTCATGAAAATGATAAAACTAATCCTCATTCAGTTACTAAACAACAAGTGGGTCTCGGAAATGTTGAGA
ATGTTAAGCAGGAGACACCTGATGGTGCGCAAAAAAAAGCTGATACTGCTTTAAACCAATCAAAAGATTATACTAACAGC
ACGGCCTTTATTACTAGACCATTAAATTCAATAACCGATGCAAATGATTTAAATCTTCCGCCTGGCACTTATCGTTTAGA
CACTAATTACATGAATGCAAATCCAGTTTTGCAAAATCAATTTCCATTAAATGATAACAGAACAGGTTTATTAATTATCT
ACCCCTCTGCAAATAAATGGGCTACACGTCAAGATTGGTTTAGCATCTCTACGAAAACACTTTATACAAGGGTAGCAGTT
AATGGTACTGATTATTCAGGGTGGTATATATTAGAGAATTCGGAAGGTTCACAAAATAAAGCGGATAAAGCTTTAGCTGA
TGCTAAAAACTATGTTGAAACAAATTATACAAATCAAAAGTTAACTGTTCTAACAGGATCAAATGCAATCCAAGATGCGA
GAATAAGCGGAAATGATTACAAATACGGAATCACTTTTATGGACATAGGGGCCAATAACACTACAGGATACCCGCTCACT
TATGGATTTGTAAAAAATGAAAAGCATAGTAATTATCGCTTTACTCAGTATTTCTATGGAAATGCAGACACAACTAGTGG
AAGTTATGATCATGTAGGGACTTGGATCCGCCATTGGTGGGCAGATTCAGGCTGGACTGCGTGGCAAAAGATATCAGGGT
TTGCTCACGCTAATATTGGGACTACTGGGCGTCAAGCCCTTATTAAAGGAGAAAATAACAAAATTAAATATAACCGTATT
ATAAAAGATAGCCATAAATTGTTTGATACAAAAAACAATAGGTTTGTAGCCAGTCATGCAGGAATGCATTTAGTCAGTGC
TAGTTTATATATAGAAAATACTGAGCGATACTCCAATTTTGAATTATATGTTTATGTAAACGGCACAAAGTATAAATTAA
TGAATCAATTTAGAATGCCTACCCCTTCCAATAACAGTGATAATGAGTTTAATGCAACTGTTACTGGATCTGTTACAGTT
CCGCTTGATGCAGGAGATTATGTTGAAATTTATGTTTATGTTGGTTATTCCGGGGATGTAACACGATATGTTACAGATTC
GAATGGAGCTCTCAATTATTTTGATGTTCTGGAGCTTGGCGGAAGAAATTACCCGAGAGTTTAG

Upstream 100 bases:

>100_bases
TTGACGAGCTGGGCAATGTGATCACAGAGAGAAAGACTGACCTGGACGTCAGCGAAAACAGAACACTCGATTTCAGATTT
ACTTTTGAGGTGGTGTAAAC

Downstream 100 bases:

>100_bases
GAGGTACCTTTATGATCTTATATGATGCCATTATGTACAAGTATCCAAACGCAGTATCGAGAAAGGATTTTGAATTGCGT
AATGACGGGAACGGTTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 686

Protein sequence:

>687_residues
MAYEEKTDWLPDDPINEDDVNRWEKGIKDAHTDLAAHKNDMNNPHNTTKAQIGLGNVDNVQQASKTEFNEHNHDSTRHIT
SVERDEWNAKETPAGAQYKADQAEANAKAYTDNFAARRDNPNQVTKAQVGLGNVENVKQASLADFDAHLSNSKVHVSEGE
RNKWNAAQLIKLTGDDGKRIQLQDGTDILTLSSGFYCAVGQSVVNNPVEGDAAWYNYDIVEGGSGRKTIVAYQSWGSMMW
IGMVHTDGEFRGWKQIATTDFIDRVQTELDLHENDKTNPHSVTKQQVGLGNVENVKQETPDGAQKKADTALNQSKDYTNS
TAFITRPLNSITDANDLNLPPGTYRLDTNYMNANPVLQNQFPLNDNRTGLLIIYPSANKWATRQDWFSISTKTLYTRVAV
NGTDYSGWYILENSEGSQNKADKALADAKNYVETNYTNQKLTVLTGSNAIQDARISGNDYKYGITFMDIGANNTTGYPLT
YGFVKNEKHSNYRFTQYFYGNADTTSGSYDHVGTWIRHWWADSGWTAWQKISGFAHANIGTTGRQALIKGENNKIKYNRI
IKDSHKLFDTKNNRFVASHAGMHLVSASLYIENTERYSNFELYVYVNGTKYKLMNQFRMPTPSNNSDNEFNATVTGSVTV
PLDAGDYVEIYVYVGYSGDVTRYVTDSNGALNYFDVLELGGRNYPRV

Sequences:

>Translated_687_residues
MAYEEKTDWLPDDPINEDDVNRWEKGIKDAHTDLAAHKNDMNNPHNTTKAQIGLGNVDNVQQASKTEFNEHNHDSTRHIT
SVERDEWNAKETPAGAQYKADQAEANAKAYTDNFAARRDNPNQVTKAQVGLGNVENVKQASLADFDAHLSNSKVHVSEGE
RNKWNAAQLIKLTGDDGKRIQLQDGTDILTLSSGFYCAVGQSVVNNPVEGDAAWYNYDIVEGGSGRKTIVAYQSWGSMMW
IGMVHTDGEFRGWKQIATTDFIDRVQTELDLHENDKTNPHSVTKQQVGLGNVENVKQETPDGAQKKADTALNQSKDYTNS
TAFITRPLNSITDANDLNLPPGTYRLDTNYMNANPVLQNQFPLNDNRTGLLIIYPSANKWATRQDWFSISTKTLYTRVAV
NGTDYSGWYILENSEGSQNKADKALADAKNYVETNYTNQKLTVLTGSNAIQDARISGNDYKYGITFMDIGANNTTGYPLT
YGFVKNEKHSNYRFTQYFYGNADTTSGSYDHVGTWIRHWWADSGWTAWQKISGFAHANIGTTGRQALIKGENNKIKYNRI
IKDSHKLFDTKNNRFVASHAGMHLVSASLYIENTERYSNFELYVYVNGTKYKLMNQFRMPTPSNNSDNEFNATVTGSVTV
PLDAGDYVEIYVYVGYSGDVTRYVTDSNGALNYFDVLELGGRNYPRV
>Mature_686_residues
AYEEKTDWLPDDPINEDDVNRWEKGIKDAHTDLAAHKNDMNNPHNTTKAQIGLGNVDNVQQASKTEFNEHNHDSTRHITS
VERDEWNAKETPAGAQYKADQAEANAKAYTDNFAARRDNPNQVTKAQVGLGNVENVKQASLADFDAHLSNSKVHVSEGER
NKWNAAQLIKLTGDDGKRIQLQDGTDILTLSSGFYCAVGQSVVNNPVEGDAAWYNYDIVEGGSGRKTIVAYQSWGSMMWI
GMVHTDGEFRGWKQIATTDFIDRVQTELDLHENDKTNPHSVTKQQVGLGNVENVKQETPDGAQKKADTALNQSKDYTNST
AFITRPLNSITDANDLNLPPGTYRLDTNYMNANPVLQNQFPLNDNRTGLLIIYPSANKWATRQDWFSISTKTLYTRVAVN
GTDYSGWYILENSEGSQNKADKALADAKNYVETNYTNQKLTVLTGSNAIQDARISGNDYKYGITFMDIGANNTTGYPLTY
GFVKNEKHSNYRFTQYFYGNADTTSGSYDHVGTWIRHWWADSGWTAWQKISGFAHANIGTTGRQALIKGENNKIKYNRII
KDSHKLFDTKNNRFVASHAGMHLVSASLYIENTERYSNFELYVYVNGTKYKLMNQFRMPTPSNNSDNEFNATVTGSVTVP
LDAGDYVEIYVYVGYSGDVTRYVTDSNGALNYFDVLELGGRNYPRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqcC

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDV_BACSU (P54341)

Other databases:

- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   E69733
- RefSeq:   NP_389158.1
- ProteinModelPortal:   P54341
- EnsemblBacteria:   EBBACT00000004055
- GeneID:   939421
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12750
- NMPDR:   fig|224308.1.peg.1277
- GenoList:   BSU12750
- GeneTree:   EBGT00050000000239
- ProtClustDB:   CLSK887137
- BioCyc:   BSUB:BSU12750-MONOMER
- InterPro:   IPR008983
- Gene3D:   G3DSA:2.60.120.40

Pfam domain/function: SSF49842 TNF_like

EC number: NA

Molecular weight: Translated: 77078; Mature: 76947

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYEEKTDWLPDDPINEDDVNRWEKGIKDAHTDLAAHKNDMNNPHNTTKAQIGLGNVDNV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCH
QQASKTEFNEHNHDSTRHITSVERDEWNAKETPAGAQYKADQAEANAKAYTDNFAARRDN
HHHHHCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCEECCHHHCCCHHCCCCCHHCCCC
PNQVTKAQVGLGNVENVKQASLADFDAHLSNSKVHVSEGERNKWNAAQLIKLTGDDGKRI
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCEE
QLQDGTDILTLSSGFYCAVGQSVVNNPVEGDAAWYNYDIVEGGSGRKTIVAYQSWGSMMW
EEECCCEEEEECCCEEEEECHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEE
IGMVHTDGEFRGWKQIATTDFIDRVQTELDLHENDKTNPHSVTKQQVGLGNVENVKQETP
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCC
DGAQKKADTALNQSKDYTNSTAFITRPLNSITDANDLNLPPGTYRLDTNYMNANPVLQNQ
CCHHHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCEEEECCEECCCCCCCCC
FPLNDNRTGLLIIYPSANKWATRQDWFSISTKTLYTRVAVNGTDYSGWYILENSEGSQNK
CCCCCCCCEEEEEEECCCCCCCCCHHEEEECEEEEEEEEECCCCCCCEEEEECCCCCCCH
ADKALADAKNYVETNYTNQKLTVLTGSNAIQDARISGNDYKYGITFMDIGANNTTGYPLT
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECCCCEEEEEEEEEECCCCCCCCCEE
YGFVKNEKHSNYRFTQYFYGNADTTSGSYDHVGTWIRHWWADSGWTAWQKISGFAHANIG
EEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCEEECCCC
TTGRQALIKGENNKIKYNRIIKDSHKLFDTKNNRFVASHAGMHLVSASLYIENTERYSNF
CCCCEEEEECCCCEEEEEEEECCCHHHCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCE
ELYVYVNGTKYKLMNQFRMPTPSNNSDNEFNATVTGSVTVPLDAGDYVEIYVYVGYSGDV
EEEEEECCCEEEEHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEECCCCE
TRYVTDSNGALNYFDVLELGGRNYPRV
EEEEECCCCCEEHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AYEEKTDWLPDDPINEDDVNRWEKGIKDAHTDLAAHKNDMNNPHNTTKAQIGLGNVDNV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCH
QQASKTEFNEHNHDSTRHITSVERDEWNAKETPAGAQYKADQAEANAKAYTDNFAARRDN
HHHHHCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCEECCHHHCCCHHCCCCCHHCCCC
PNQVTKAQVGLGNVENVKQASLADFDAHLSNSKVHVSEGERNKWNAAQLIKLTGDDGKRI
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCEE
QLQDGTDILTLSSGFYCAVGQSVVNNPVEGDAAWYNYDIVEGGSGRKTIVAYQSWGSMMW
EEECCCEEEEECCCEEEEECHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEE
IGMVHTDGEFRGWKQIATTDFIDRVQTELDLHENDKTNPHSVTKQQVGLGNVENVKQETP
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCC
DGAQKKADTALNQSKDYTNSTAFITRPLNSITDANDLNLPPGTYRLDTNYMNANPVLQNQ
CCHHHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCEEEECCEECCCCCCCCC
FPLNDNRTGLLIIYPSANKWATRQDWFSISTKTLYTRVAVNGTDYSGWYILENSEGSQNK
CCCCCCCCEEEEEEECCCCCCCCCHHEEEECEEEEEEEEECCCCCCCEEEEECCCCCCCH
ADKALADAKNYVETNYTNQKLTVLTGSNAIQDARISGNDYKYGITFMDIGANNTTGYPLT
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECCCCEEEEEEEEEECCCCCCCCCEE
YGFVKNEKHSNYRFTQYFYGNADTTSGSYDHVGTWIRHWWADSGWTAWQKISGFAHANIG
EEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCEEECCCC
TTGRQALIKGENNKIKYNRIIKDSHKLFDTKNNRFVASHAGMHLVSASLYIENTERYSNF
CCCCEEEEECCCCEEEEEEEECCCHHHCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCE
ELYVYVNGTKYKLMNQFRMPTPSNNSDNEFNATVTGSVTVPLDAGDYVEIYVYVGYSGDV
EEEEEECCCEEEEHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEECCCCE
TRYVTDSNGALNYFDVLELGGRNYPRV
EEEEECCCCCEEHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377