Click here to switch to the map view.

The map label for this gene is yjlA

Identifier: 16078291

GI number: 16078291

Start: 1296620

End: 1297594

Strand: Reverse

Name: yjlA

Synonym: BSU12260

Alternate gene names: 16078291

Gene position: 1297594-1296620 (Counterclockwise)

Preceding gene: 16078305

Following gene: 16078290

Centisome position: 30.78

GC content: 46.67

Gene sequence:

>975_bases
ATGAAAGCTATCGTTATCGGAATATTGGCTTCACTCTTTTTCGCCGTTACCTTTATATTAAACAGAGCGATGGAGTTATC
AGGAGGCAGCTGGCTTTGGAGCTCTTCGCTGCGCTTTATTTTTATGGTGCCATTTTTATGTTTGATTGTCATCATGAGAG
GGACATTCACGCCTCTCTTACTAGAAATGAGGAAAAAGCCGTTTTATTGGATCAAATGGAGCTTCGTCGGTTTCGTGCTT
TTTTACGCACCGATTACATTTGCGGCTGCATACGGTCCGGGGTGGCTCATAGCTGGAACCTGGCAAATTACAATTGTAGC
CGGGGTGCTCTTATCTCCTTTGTTTTATGTCAAACAAGATATGCCGGGCGGTCCGCAGCTCATTCGCCAAAAGATTCCCC
TGGTTTCACTTGGCACTTCTGTGATCATCCTGATTGGAGCGGCTCTGATTCAGCTTCAGCATGCAGAATCGCTTTCTGGG
AGGATGCTGCTTTTCAGTGTGCTGCCGGTTGTCATTGCGGCTTTTGCCTATCCGTTAGGAAACCGAAGAATGCTCGAAGA
ATACGGAGGCCGGCTTGATACATTTCAGCGCGTGCTTGGAATGACATTGGCAAGCCTTCCATTCTGGCTTATATTAGCAG
CTTACGGCTGGTGGTCAGATGGCCTTCCAACAGCAAGTCAAACCGTTCAATCCTTTATCGTTGCCGTCAGCTCAGGCATC
ATTGCGACGGTTTTATTTTTCTGGGCCACTGATATGGTAAGAGACAATCCGCAAAAACTCGCAGCTGTTGAAGCCACTCA
ATCCGGTGAAGTGATTTTCGCGCTGCTTGGTGAAATTGTTCTGCTGTCAGGCGTTTTCCCATCTCTATTATCATTTGCCG
GTTTGTTCATTATAATAGCGGGGATGATGTTACATACCTTCGCTTCACAGCCGAGAAAACCGAAAAAGAAAGCACAGTCA
AATCTGACTGCGTAG

Upstream 100 bases:

>100_bases
ATAGCGGTTCGCCAAACATGATGTTTTTCTCATGATTCCATTGATCTGCATGATACCGAATAGTATAGTATAAAAAAATA
ATGCCAGAATGAGGGATATC

Downstream 100 bases:

>100_bases
CATCTGCAGGAGAATGGGTGAAAGCCTGTTCTCCTTTATTTGTGCTACCAAAAGGAATCTGTTTCACGTTATAGTTAAAT
ATAATGTCAGCCTACTTATA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKAIVIGILASLFFAVTFILNRAMELSGGSWLWSSSLRFIFMVPFLCLIVIMRGTFTPLLLEMRKKPFYWIKWSFVGFVL
FYAPITFAAAYGPGWLIAGTWQITIVAGVLLSPLFYVKQDMPGGPQLIRQKIPLVSLGTSVIILIGAALIQLQHAESLSG
RMLLFSVLPVVIAAFAYPLGNRRMLEEYGGRLDTFQRVLGMTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGI
IATVLFFWATDMVRDNPQKLAAVEATQSGEVIFALLGEIVLLSGVFPSLLSFAGLFIIIAGMMLHTFASQPRKPKKKAQS
NLTA

Sequences:

>Translated_324_residues
MKAIVIGILASLFFAVTFILNRAMELSGGSWLWSSSLRFIFMVPFLCLIVIMRGTFTPLLLEMRKKPFYWIKWSFVGFVL
FYAPITFAAAYGPGWLIAGTWQITIVAGVLLSPLFYVKQDMPGGPQLIRQKIPLVSLGTSVIILIGAALIQLQHAESLSG
RMLLFSVLPVVIAAFAYPLGNRRMLEEYGGRLDTFQRVLGMTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGI
IATVLFFWATDMVRDNPQKLAAVEATQSGEVIFALLGEIVLLSGVFPSLLSFAGLFIIIAGMMLHTFASQPRKPKKKAQS
NLTA
>Mature_324_residues
MKAIVIGILASLFFAVTFILNRAMELSGGSWLWSSSLRFIFMVPFLCLIVIMRGTFTPLLLEMRKKPFYWIKWSFVGFVL
FYAPITFAAAYGPGWLIAGTWQITIVAGVLLSPLFYVKQDMPGGPQLIRQKIPLVSLGTSVIILIGAALIQLQHAESLSG
RMLLFSVLPVVIAAFAYPLGNRRMLEEYGGRLDTFQRVLGMTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGI
IATVLFFWATDMVRDNPQKLAAVEATQSGEVIFALLGEIVLLSGVFPSLLSFAGLFIIIAGMMLHTFASQPRKPKKKAQS
NLTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJLA_BACSU (O34428)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   G69851
- RefSeq:   NP_389108.1
- ProteinModelPortal:   O34428
- EnsemblBacteria:   EBBACT00000000357
- GeneID:   939404
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12260
- NMPDR:   fig|224308.1.peg.1227
- GenoList:   BSU12260
- GeneTree:   EBGT00050000002159
- HOGENOM:   HBG337923
- OMA:   LIAGTWQ
- ProtClustDB:   CLSK2484782
- BioCyc:   BSUB:BSU12260-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35625; Mature: 35625

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe77df08)-; HASH(0xe80102c)-; HASH(0xe150314)-; HASH(0xc431608)-; HASH(0xc7bd51c)-; HASH(0xd784580)-; HASH(0xe0d1084)-; HASH(0xd50a8cc)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIVIGILASLFFAVTFILNRAMELSGGSWLWSSSLRFIFMVPFLCLIVIMRGTFTPLL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LEMRKKPFYWIKWSFVGFVLFYAPITFAAAYGPGWLIAGTWQITIVAGVLLSPLFYVKQD
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHCC
MPGGPQLIRQKIPLVSLGTSVIILIGAALIQLQHAESLSGRMLLFSVLPVVIAAFAYPLG
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
NRRMLEEYGGRLDTFQRVLGMTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGI
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IATVLFFWATDMVRDNPQKLAAVEATQSGEVIFALLGEIVLLSGVFPSLLSFAGLFIIIA
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMMLHTFASQPRKPKKKAQSNLTA
HHHHHHHHCCCCCCHHHHHCCCCH
>Mature Secondary Structure
MKAIVIGILASLFFAVTFILNRAMELSGGSWLWSSSLRFIFMVPFLCLIVIMRGTFTPLL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LEMRKKPFYWIKWSFVGFVLFYAPITFAAAYGPGWLIAGTWQITIVAGVLLSPLFYVKQD
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHCC
MPGGPQLIRQKIPLVSLGTSVIILIGAALIQLQHAESLSGRMLLFSVLPVVIAAFAYPLG
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
NRRMLEEYGGRLDTFQRVLGMTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGI
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IATVLFFWATDMVRDNPQKLAAVEATQSGEVIFALLGEIVLLSGVFPSLLSFAGLFIIIA
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMMLHTFASQPRKPKKKAQSNLTA
HHHHHHHHCCCCCCHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377