Click here to switch to the map view.

The map label for this gene is yjfA

Identifier: 16078276

GI number: 16078276

Start: 1282571

End: 1283044

Strand: Reverse

Name: yjfA

Synonym: BSU12110

Alternate gene names: 16078276

Gene position: 1283044-1282571 (Counterclockwise)

Preceding gene: 16078277

Following gene: 16078274

Centisome position: 30.44

GC content: 43.46

Gene sequence:

>474_bases
TTGAAAAGACTGTTTATGAAGGCTTCATTGGTGTTATTCGCAGTAGTATTTGTTTTTGCCGTCAAAGGTGCACCCGCCAA
GGCGGAAACCCATGCCTACGATGGAAAAAGCCCTTATTACAATGATTGTGCGTCCAGCGGCTCTACAAAAAAATCCTCAA
ACTTAGTGAATGCCAGCAATCAAGTCATCGGAGTAGTCGAGCTTAAATTCAGCAGTACATGTAAAACGGCTTGGGCAAAA
ATCACGATGAATAATACATTGACGTCTGGCTATGAAGCAAATGCGGAGATTACCCGGAACACAGACGGAAAAAGATATAA
TTGTGATTCTGCAGGCGGCAATGGAAAAGCGGTGGCCGGCCAAAAGTCTTGCTATACACCGATGGTATATGATTTAGATC
CAAGGACTTCTTACGCTTTCGGCAAGTATTCAGGACCAAACTTAAATGTTTGGGCCACCACAGGCTCTTATTAA

Upstream 100 bases:

>100_bases
CTCCATCCTCCCGGCCGCCTTTATTGTTCACAAAAAAGCATGCATGTTTTGATTGTTCCTCCATATGATTTATTGTTTGC
CATATTAAGGAGGTCATAAA

Downstream 100 bases:

>100_bases
ATAGAAAAAAGGCTGTCCGTACGGACAGCCTTTTCTAATTTATTTCGCTTCTCTTTGTTTTTTAACCTCTTCAAGCTGAG
AAACTGTCACCAATTGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKRLFMKASLVLFAVVFVFAVKGAPAKAETHAYDGKSPYYNDCASSGSTKKSSNLVNASNQVIGVVELKFSSTCKTAWAK
ITMNNTLTSGYEANAEITRNTDGKRYNCDSAGGNGKAVAGQKSCYTPMVYDLDPRTSYAFGKYSGPNLNVWATTGSY

Sequences:

>Translated_157_residues
MKRLFMKASLVLFAVVFVFAVKGAPAKAETHAYDGKSPYYNDCASSGSTKKSSNLVNASNQVIGVVELKFSSTCKTAWAK
ITMNNTLTSGYEANAEITRNTDGKRYNCDSAGGNGKAVAGQKSCYTPMVYDLDPRTSYAFGKYSGPNLNVWATTGSY
>Mature_157_residues
MKRLFMKASLVLFAVVFVFAVKGAPAKAETHAYDGKSPYYNDCASSGSTKKSSNLVNASNQVIGVVELKFSSTCKTAWAK
ITMNNTLTSGYEANAEITRNTDGKRYNCDSAGGNGKAVAGQKSCYTPMVYDLDPRTSYAFGKYSGPNLNVWATTGSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJFA_BACSU (O34554)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   H69849
- RefSeq:   NP_389093.1
- EnsemblBacteria:   EBBACT00000000832
- GeneID:   939830
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12110
- NMPDR:   fig|224308.1.peg.1212
- GenoList:   BSU12110
- GeneTree:   EBGT00050000003782
- HOGENOM:   HBG341173
- OMA:   VTSMFST
- ProtClustDB:   CLSK887094
- BioCyc:   BSUB:BSU12110-MONOMER
- InterPro:   IPR021224

Pfam domain/function: PF10901 DUF2690

EC number: NA

Molecular weight: Translated: 16880; Mature: 16880

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFMKASLVLFAVVFVFAVKGAPAKAETHAYDGKSPYYNDCASSGSTKKSSNLVNASN
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCC
QVIGVVELKFSSTCKTAWAKITMNNTLTSGYEANAEITRNTDGKRYNCDSAGGNGKAVAG
CEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCEECC
QKSCYTPMVYDLDPRTSYAFGKYSGPNLNVWATTGSY
CCCCCCCEEEECCCCCCEECCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MKRLFMKASLVLFAVVFVFAVKGAPAKAETHAYDGKSPYYNDCASSGSTKKSSNLVNASN
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCC
QVIGVVELKFSSTCKTAWAKITMNNTLTSGYEANAEITRNTDGKRYNCDSAGGNGKAVAG
CEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCEECC
QKSCYTPMVYDLDPRTSYAFGKYSGPNLNVWATTGSY
CCCCCCCEEEECCCCCCEECCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377