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The map label for this gene is gerPA

Identifier: 16078136

GI number: 16078136

Start: 1150206

End: 1150427

Strand: Reverse

Name: gerPA

Synonym: BSU10720

Alternate gene names: 16078136

Gene position: 1150427-1150206 (Counterclockwise)

Preceding gene: 16078137

Following gene: 16078135

Centisome position: 27.29

GC content: 50.45

Gene sequence:

>222_bases
ATGCCGGCCATTGTCGGAGCGTTTAAAATTAATGCGATTGGTACGAGCGGAGTCGTTCACATCGGGGACTGCATTACGAT
TTCTCCTCAGGCTCAGGTCAGAACGTTTGCCGGTGCTGGCAGCTTTAATACCGGCGACAGCCTCAAGGTGATGAATTATC
AAAACGCGACGAATGTGTATGACAATGATGCGGTTGATCAGCCGATCGTGGCCAATGCGTAA

Upstream 100 bases:

>100_bases
TGCGTTTGTCATAAGCTATCGTGAATAGCCCAATTGAAATCGGAATTGTCATTTCACTTTACCTGTCTTTTTTTAATTTT
TCAACAAAGGATGTGCTCGT

Downstream 100 bases:

>100_bases
AAGGAGTGAGGCTCATGAACTTCTATATTAATCAAACCATTCAAATCAACTATCTCCGGCTGGAATCAATCAGCAACTCC
TCCATTCTGCAAATCGGGAG

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MPAIVGAFKINAIGTSGVVHIGDCITISPQAQVRTFAGAGSFNTGDSLKVMNYQNATNVYDNDAVDQPIVANA

Sequences:

>Translated_73_residues
MPAIVGAFKINAIGTSGVVHIGDCITISPQAQVRTFAGAGSFNTGDSLKVMNYQNATNVYDNDAVDQPIVANA
>Mature_72_residues
PAIVGAFKINAIGTSGVVHIGDCITISPQAQVRTFAGAGSFNTGDSLKVMNYQNATNVYDNDAVDQPIVANA

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERPA_BACSU (O06721)

Other databases:

- EMBL:   Y09476
- EMBL:   AL009126
- PIR:   H69836
- RefSeq:   NP_388953.1
- EnsemblBacteria:   EBBACT00000002184
- GeneID:   936348
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10720
- NMPDR:   fig|224308.1.peg.1072
- GenoList:   BSU10720
- GeneTree:   EBGT00070000032155
- HOGENOM:   HBG363676
- OMA:   DCITISP
- ProtClustDB:   CLSK2393377
- BioCyc:   BSUB:BSU10720-MONOMER
- InterPro:   IPR019618

Pfam domain/function: PF10676 gerPA

EC number: NA

Molecular weight: Translated: 7542; Mature: 7410

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIVGAFKINAIGTSGVVHIGDCITISPQAQVRTFAGAGSFNTGDSLKVMNYQNATNVY
CCCEECEEEEEEECCCCEEEECCEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC
DNDAVDQPIVANA
CCCCCCCCEECCC
>Mature Secondary Structure 
PAIVGAFKINAIGTSGVVHIGDCITISPQAQVRTFAGAGSFNTGDSLKVMNYQNATNVY
CCEECEEEEEEECCCCEEEECCEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC
DNDAVDQPIVANA
CCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 10715007