Click here to switch to the map view.

The map label for this gene is yhjE

Identifier: 16078112

GI number: 16078112

Start: 1121550

End: 1122173

Strand: Direct

Name: yhjE

Synonym: BSU10480

Alternate gene names: 16078112

Gene position: 1121550-1122173 (Clockwise)

Preceding gene: 16078108

Following gene: 16078113

Centisome position: 26.6

GC content: 47.28

Gene sequence:

>624_bases
ATGTTGGAGCATTTTTTATCCTATTTGACACAAGAACATTTAACTGAATTATTTCAAAGCTATAGGGCTTTCGGTCCGCT
CATTGCTGTGCTGCTGCCTTTAATTGAAGCATTTCTCCCGTTTTTGCCGCTGATCGTGTTTGTGGTGGCGAATACGAACT
CGTTTGGCTTGTGGGAAGGATTCATCCTATCCTGGGCGGGATCAACTGCTGGTTCCATTCTCGTCTTTTTGATTGTCCGT
CAATACGGACAGAGAAAATTGCTTGGATTTATCCGCAGTCATCCGTCTGTCAGAAAGCTGATGTTATGGGTGGAAAGACA
CGGCTTCGGTCCCATGTTTCTTCTGCTTTGTTTTCCATTTACACCGTCAGCCGCGGTGAATGTTGTTGCCGGTTTGTCAA
GGATCGGAACGCGGCCGTTTATTTTGGCGGCAGCCTCGGGGAAGCTTGTCATGATTTTTATGATCAGCTTCATCGGATAT
GATCTGCACGCGCTGATTACACAGCCGATTCGAACGGTCATCGCCGTATTGGTGATCACTGTCTTATGGTATGTCGGCAA
AAAGGTGGAGCGGTATCTGCATGTAAGAGCCAGTCAGCGTGAGCATGATGGAGGGAGACAGTAA

Upstream 100 bases:

>100_bases
GCTGGTGAAATGTTTCAAGACAGAAAAAATCACCAAAACTTTTTAGTTTTCTGCTGATAATGTGTAGAATAAGGATAGAC
AAACCCGGTAAGGAGTATAA

Downstream 100 bases:

>100_bases
CATGAAAAAACGGTTTTGGTTTCTTGCCGGTGTAGTGTCCGTTGTTCTCGCCATTCAGGTTAAAAATGCTGTCTTTATTG
ATTACAAGGTAGAAGGCGTC

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLEHFLSYLTQEHLTELFQSYRAFGPLIAVLLPLIEAFLPFLPLIVFVVANTNSFGLWEGFILSWAGSTAGSILVFLIVR
QYGQRKLLGFIRSHPSVRKLMLWVERHGFGPMFLLLCFPFTPSAAVNVVAGLSRIGTRPFILAAASGKLVMIFMISFIGY
DLHALITQPIRTVIAVLVITVLWYVGKKVERYLHVRASQREHDGGRQ

Sequences:

>Translated_207_residues
MLEHFLSYLTQEHLTELFQSYRAFGPLIAVLLPLIEAFLPFLPLIVFVVANTNSFGLWEGFILSWAGSTAGSILVFLIVR
QYGQRKLLGFIRSHPSVRKLMLWVERHGFGPMFLLLCFPFTPSAAVNVVAGLSRIGTRPFILAAASGKLVMIFMISFIGY
DLHALITQPIRTVIAVLVITVLWYVGKKVERYLHVRASQREHDGGRQ
>Mature_207_residues
MLEHFLSYLTQEHLTELFQSYRAFGPLIAVLLPLIEAFLPFLPLIVFVVANTNSFGLWEGFILSWAGSTAGSILVFLIVR
QYGQRKLLGFIRSHPSVRKLMLWVERHGFGPMFLLLCFPFTPSAAVNVVAGLSRIGTRPFILAAASGKLVMIFMISFIGY
DLHALITQPIRTVIAVLVITVLWYVGKKVERYLHVRASQREHDGGRQ

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788049, Length=181, Percent_Identity=26.5193370165746, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHJE_BACSU (O07559)

Other databases:

- EMBL:   Y14081
- EMBL:   AL009126
- PIR:   E69833
- RefSeq:   NP_388929.1
- ProteinModelPortal:   O07559
- EnsemblBacteria:   EBBACT00000003035
- GeneID:   936333
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10480
- NMPDR:   fig|224308.1.peg.1048
- GenoList:   BSU10480
- GeneTree:   EBGT00050000001741
- HOGENOM:   HBG693075
- OMA:   FQSYRAF
- PhylomeDB:   O07559
- ProtClustDB:   CLSK2301449
- BioCyc:   BSUB:BSU10480-MONOMER
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 23331; Mature: 23331

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcf29ddc)-; HASH(0xe2d58e0)-; HASH(0xe3d4008)-; HASH(0xe0a0a24)-; HASH(0xc3b72f8)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEHFLSYLTQEHLTELFQSYRAFGPLIAVLLPLIEAFLPFLPLIVFVVANTNSFGLWEG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
FILSWAGSTAGSILVFLIVRQYGQRKLLGFIRSHPSVRKLMLWVERHGFGPMFLLLCFPF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCC
TPSAAVNVVAGLSRIGTRPFILAAASGKLVMIFMISFIGYDLHALITQPIRTVIAVLVIT
CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLWYVGKKVERYLHVRASQREHDGGRQ
HHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MLEHFLSYLTQEHLTELFQSYRAFGPLIAVLLPLIEAFLPFLPLIVFVVANTNSFGLWEG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
FILSWAGSTAGSILVFLIVRQYGQRKLLGFIRSHPSVRKLMLWVERHGFGPMFLLLCFPF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCC
TPSAAVNVVAGLSRIGTRPFILAAASGKLVMIFMISFIGYDLHALITQPIRTVIAVLVIT
CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLWYVGKKVERYLHVRASQREHDGGRQ
HHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377