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The map label for this gene is yhjA

Identifier: 16078108

GI number: 16078108

Start: 1118850

End: 1119119

Strand: Direct

Name: yhjA

Synonym: BSU10440

Alternate gene names: 16078108

Gene position: 1118850-1119119 (Clockwise)

Preceding gene: 16078106

Following gene: 16078112

Centisome position: 26.54

GC content: 45.93

Gene sequence:

>270_bases
ATGAAAAAAGCGGCGGCGGTTTTGCTGTCACTCGGTCTCGTTTTCGGTTTTTCATACGGAGCTGGCCATGTGGCGGAAGC
CAAAACAAAGGTGAAGGTCTATAAGAACTGCAAGGAGCTAAACAAAGTATACAAAGGCGGAGTGGCCCGCACATCGAAGG
TGAAAAACAAAGGCGGAAAAACGAAGTACAAGCCTTACGTTTCTAAGGCACTTTACGATGCCAATAAAAACAAAGACCGC
GATAAAGATCTTATCGCCTGTGAACGGTAA

Upstream 100 bases:

>100_bases
GCCTTCTTCCATATTTATCTTGTCAAATAAGACTATATGAATTATGATAAATTCGAGCTATAAATCAACTAAATATTGGG
TGTTGGGAGAGTGAATCGTC

Downstream 100 bases:

>100_bases
ATAAGAAAAAGCAATCTGGTGTCCAGATTGCTTTTTTTATGCTTAGGCCGCCTGATCGGCCGCAGCGCTTTTCGCCTTCC
TTGTCATAAGGCTGACTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MKKAAAVLLSLGLVFGFSYGAGHVAEAKTKVKVYKNCKELNKVYKGGVARTSKVKNKGGKTKYKPYVSKALYDANKNKDR
DKDLIACER

Sequences:

>Translated_89_residues
MKKAAAVLLSLGLVFGFSYGAGHVAEAKTKVKVYKNCKELNKVYKGGVARTSKVKNKGGKTKYKPYVSKALYDANKNKDR
DKDLIACER
>Mature_89_residues
MKKAAAVLLSLGLVFGFSYGAGHVAEAKTKVKVYKNCKELNKVYKGGVARTSKVKNKGGKTKYKPYVSKALYDANKNKDR
DKDLIACER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHJA_BACSU (O07555)

Other databases:

- EMBL:   Y14081
- EMBL:   AL009126
- PIR:   A69833
- RefSeq:   NP_388925.1
- EnsemblBacteria:   EBBACT00000001207
- GeneID:   936321
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10440
- NMPDR:   fig|224308.1.peg.1044
- GenoList:   BSU10440
- GeneTree:   EBGT00050000003038
- HOGENOM:   HBG338687
- OMA:   NCKALNK
- ProtClustDB:   CLSK887012
- BioCyc:   BSUB:BSU10440-MONOMER
- InterPro:   IPR008613
- SMART:   SM00894

Pfam domain/function: PF05901 Excalibur

EC number: NA

Molecular weight: Translated: 9802; Mature: 9802

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAAAVLLSLGLVFGFSYGAGHVAEAKTKVKVYKNCKELNKVYKGGVARTSKVKNKGGK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
TKYKPYVSKALYDANKNKDRDKDLIACER
CCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKAAAVLLSLGLVFGFSYGAGHVAEAKTKVKVYKNCKELNKVYKGGVARTSKVKNKGGK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
TKYKPYVSKALYDANKNKDRDKDLIACER
CCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377