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The map label for this gene is yhfK

Identifier: 16078090

GI number: 16078090

Start: 1100219

End: 1100863

Strand: Direct

Name: yhfK

Synonym: BSU10260

Alternate gene names: 16078090

Gene position: 1100219-1100863 (Clockwise)

Preceding gene: 16078089

Following gene: 255767237

Centisome position: 26.1

GC content: 49.15

Gene sequence:

>645_bases
ATGAAAGTGTTTTTAATCGGAGCGAACGGACAAATCGGGCAAAGACTCGTCTCTTTATTCCAAGATAATCCTGATCATTC
CATCAGAGCGATGGTCAGAAAAGAAGAACAGAAAGCGTCTCTTGAAGCTGCCGGTGCAGAAGCTGTGCTTGCGAATCTGG
AGGGCAGCCCGGAAGAAATCGCCGCTGCGGCAAAAGGTTGTGACGCGATCATTTTCACAGCCGGTTCCGGCGGCAGCACA
GGCTATGATAAAACGCTGCTGGTGGATCTTGATGGAGCGGCAAAAGCCATTGAAGCTGCGGCCATTGCCGGAATCAAACG
GTTTATTATGGTCAGCGCCCTGCAAGCCCATAACCGTGAAAATTGGAATGAGGCACTCAAGCCTTATTATGTGGCCAAGC
ATTATGCTGATAAAATTCTGGAAGCGAGCGGTTTAACCTATACGATTATCCGTCCGGGAGGCCTTCGCAATGAGCCTGGA
ACGGGAACTGTTTCAGCAGCGAAGGATCTGGAGCGGGGATTTATTTCCCGTGATGACGTTGCAAAAACGGTCATTGCCTC
TTTAGATGAGAAGAATACGGAAAATCGGGCCTTTGATCTGACAGAAGGAGATACGCCGATTGCCGAAGCATTGAAGAAAC
TATGA

Upstream 100 bases:

>100_bases
ATTACGAAAGAGGATTTCCTTGATCTGATTTACTAAGGCAAAACACATCGTTTGAAAGAGCGGTTGTGTTTTTGAAATAA
TGGAGGCAGGAGGGATTCAC

Downstream 100 bases:

>100_bases
CAGTACTGACACTCAGGGCTTTTTGCTCTTGAGTGTTTTTTTCTGTTTCTCTATAATGGAGAAGAAAGCTTGGCTTCAAT
AATGAATGACTATTCATTCA

Product: epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGST
GYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPYYVAKHYADKILEASGLTYTIIRPGGLRNEPG
TGTVSAAKDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL

Sequences:

>Translated_214_residues
MKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGST
GYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPYYVAKHYADKILEASGLTYTIIRPGGLRNEPG
TGTVSAAKDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
>Mature_214_residues
MKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGST
GYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPYYVAKHYADKILEASGLTYTIIRPGGLRNEPG
TGTVSAAKDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family

Homologues:

Organism=Saccharomyces cerevisiae, GI6323737, Length=225, Percent_Identity=37.7777777777778, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFK_BACSU (O07609)

Other databases:

- EMBL:   Y14083
- EMBL:   AL009126
- PIR:   H69830
- RefSeq:   NP_388907.1
- ProteinModelPortal:   O07609
- SMR:   O07609
- EnsemblBacteria:   EBBACT00000001462
- GeneID:   936309
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10260
- NMPDR:   fig|224308.1.peg.1026
- GenoList:   BSU10260
- GeneTree:   EBGT00050000000683
- HOGENOM:   HBG734645
- OMA:   KRAVENY
- PhylomeDB:   O07609
- ProtClustDB:   CLSK887000
- BioCyc:   BSUB:BSU10260-MONOMER
- GO:   GO:0005488
- InterPro:   IPR016040
- InterPro:   IPR008030
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF05368 NmrA

EC number: NA

Molecular weight: Translated: 22760; Mature: 22760

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: ACT_SITE 129-129

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEI
CEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCHHHH
AAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRE
HHHHCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NWNEALKPYYVAKHYADKILEASGLTYTIIRPGGLRNEPGTGTVSAAKDLERGFISRDDV
CHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
AKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
HHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHCC
>Mature Secondary Structure
MKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEI
CEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCHHHH
AAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRE
HHHHCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NWNEALKPYYVAKHYADKILEASGLTYTIIRPGGLRNEPGTGTVSAAKDLERGFISRDDV
CHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
AKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
HHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377