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The map label for this gene is ecsC

Identifier: 16078070

GI number: 16078070

Start: 1079422

End: 1080132

Strand: Direct

Name: ecsC

Synonym: BSU10060

Alternate gene names: 16078070

Gene position: 1079422-1080132 (Clockwise)

Preceding gene: 16078069

Following gene: 255767236

Centisome position: 25.61

GC content: 44.02

Gene sequence:

>711_bases
ATGACAGATAATCAGCTGCTGATGCAGGAAGCTTTGGAATGGAAAATGCATTTTTTGCGAAAGGATTCCATGTTTGAACG
CTTTTCGAAGCGTGTCCAGACGAAGGTGAATGAACGGATTCCTGAAAAAATCCATACGGTCGTCACCGAGAGTGTGAAAA
AAATGGTAGAAGCGACAATGGCCGGCTCTAATATCATCACCTATAAAAAGGATACAAGTGCACTGTCGCTCAGTGAAAAA
AACGAATTGGCGAAAAAAACGATTGTTTCTTATCAAAAAGTGGCAGCTGCTGAGGGAGTCGGCACCGGAGCGGGCGGCAT
TTTTTTAAGCATTGCTGATTTTCCGCTGCTGCTTTCAATTAAGATGAAGTGTTTATTTACCTTGTCTTCCATTTACGGCT
TTGATGTCAAGGATGCACAAGAAAGGATATTTTTGCTGCTCGTGTTTCAGCTTGCGTTTTCGAGTGATGATGGCCGTAAG
TCGCTTTTTTCTGTCATCGAAAATTGGGAGACGGAGAAAAAGAGCATCGACTGGAGAGTGTTCCAGCAGGAATATCGCGA
TTATATCGACGTCGTGAAGCTTTTTCAGCTTTTGCCGGGCGTAGGAGCGGCAGTCGGCGGAATTGCCAATTATAAGCTGC
TTGCTCAGCTTGGAGAAACGGCAAGACATGTTTTTCATCTGAGGATATTAAAGGAAACAGCCGGAGAATAA

Upstream 100 bases:

>100_bases
CTGATCGGTTCTGCCGTTCTGATTTTTGTTGTTTTGCCTGCTTATATGACGACCAGGCTGAAAAAGCACGGAAAGCTGTG
AACTGAAAAGAGGTAATCAA

Downstream 100 bases:

>100_bases
ACACTCCGGCTGTTTTTTTATAGCTGATGATAGGTGATCGCAGCGCCGGCAAGGACCTTGGCCGCTGTCAGCATGGCTTT
TTCGTTGATATCAAATTTCG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTDNQLLMQEALEWKMHFLRKDSMFERFSKRVQTKVNERIPEKIHTVVTESVKKMVEATMAGSNIITYKKDTSALSLSEK
NELAKKTIVSYQKVAAAEGVGTGAGGIFLSIADFPLLLSIKMKCLFTLSSIYGFDVKDAQERIFLLLVFQLAFSSDDGRK
SLFSVIENWETEKKSIDWRVFQQEYRDYIDVVKLFQLLPGVGAAVGGIANYKLLAQLGETARHVFHLRILKETAGE

Sequences:

>Translated_236_residues
MTDNQLLMQEALEWKMHFLRKDSMFERFSKRVQTKVNERIPEKIHTVVTESVKKMVEATMAGSNIITYKKDTSALSLSEK
NELAKKTIVSYQKVAAAEGVGTGAGGIFLSIADFPLLLSIKMKCLFTLSSIYGFDVKDAQERIFLLLVFQLAFSSDDGRK
SLFSVIENWETEKKSIDWRVFQQEYRDYIDVVKLFQLLPGVGAAVGGIANYKLLAQLGETARHVFHLRILKETAGE
>Mature_235_residues
TDNQLLMQEALEWKMHFLRKDSMFERFSKRVQTKVNERIPEKIHTVVTESVKKMVEATMAGSNIITYKKDTSALSLSEKN
ELAKKTIVSYQKVAAAEGVGTGAGGIFLSIADFPLLLSIKMKCLFTLSSIYGFDVKDAQERIFLLLVFQLAFSSDDGRKS
LFSVIENWETEKKSIDWRVFQQEYRDYIDVVKLFQLLPGVGAAVGGIANYKLLAQLGETARHVFHLRILKETAGE

Specific function: Unknown, does not resemble components of ABC transporters

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ECSC_BACSU (P55341)

Other databases:

- EMBL:   X87807
- EMBL:   Y14077
- EMBL:   AL009126
- PIR:   H69619
- RefSeq:   NP_388887.1
- ProteinModelPortal:   P55341
- EnsemblBacteria:   EBBACT00000000230
- GeneID:   939774
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10060
- NMPDR:   fig|224308.1.peg.1006
- GenoList:   BSU10060
- GeneTree:   EBGT00050000000930
- HOGENOM:   HBG306136
- OMA:   ARHVFHL
- ProtClustDB:   CLSK872957
- BioCyc:   BSUB:BSU10060-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26712; Mature: 26581

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNQLLMQEALEWKMHFLRKDSMFERFSKRVQTKVNERIPEKIHTVVTESVKKMVEATM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSNIITYKKDTSALSLSEKNELAKKTIVSYQKVAAAEGVGTGAGGIFLSIADFPLLLSI
CCCCEEEEECCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHHHHHHH
KMKCLFTLSSIYGFDVKDAQERIFLLLVFQLAFSSDDGRKSLFSVIENWETEKKSIDWRV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
FQQEYRDYIDVVKLFQLLPGVGAAVGGIANYKLLAQLGETARHVFHLRILKETAGE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDNQLLMQEALEWKMHFLRKDSMFERFSKRVQTKVNERIPEKIHTVVTESVKKMVEATM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSNIITYKKDTSALSLSEKNELAKKTIVSYQKVAAAEGVGTGAGGIFLSIADFPLLLSI
CCCCEEEEECCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHHHHHHH
KMKCLFTLSSIYGFDVKDAQERIFLLLVFQLAFSSDDGRKSLFSVIENWETEKKSIDWRV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
FQQEYRDYIDVVKLFQLLPGVGAAVGGIANYKLLAQLGETARHVFHLRILKETAGE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377