Click here to switch to the map view.

The map label for this gene is yhaO

Identifier: 16078055

GI number: 16078055

Start: 1064846

End: 1066072

Strand: Direct

Name: yhaO

Synonym: BSU09910

Alternate gene names: 16078055

Gene position: 1064846-1066072 (Clockwise)

Preceding gene: 255767230

Following gene: 16078056

Centisome position: 25.26

GC content: 47.76

Gene sequence:

>1227_bases
ATGTTGACTGATCTAACCTTTATTCATGCGGCAGATCTTCATCTTGACAGCCCGTTTTACGGGATATCGCATCTGCCGGA
GCCGATTTTTGCCCGGATTAAAGAAAGCACGTTTGCAAGCGTGAGACATATGATAGACGCCGCAGTGAGAGAGCACGTTG
ATTTCATTTTGCTTGCGGGAGATCTGTTTGATGAAGCCAATCGAAGCTTAAAGGCTCAGCTCTTTTTGAAAAAACAGTTT
GAAAGACTCAGAGAGTGCGGAATTTCGGTATACGTCATCTTTGGGAATCACGATCATCTTGGCGGGGAGTGGACGCCGAT
TGAATGGCCTGAGAATGTCCATATTTTTTCGTCCGCTGTTCCAGAAGAAAAATCGTTTTTTAAAGAAGGCAGGCGCATAG
CAAGCATTTACGGCTTCAGCTATCAAGCCAGAGCATTGATGGAAAACCAAGCCGCCCGCTATCGGAGATCAACTGACGCA
CCGTTTCATATCGGCATGCTCCACGGCACGCTGTCAGGATCTGAAGGACACGATCCGTATTGCCCGTTTACACATGACGA
CCTCGTGAAAAGCGGGATGGATTATTGGGCGCTTGGCCATATACATAAACGCCAGGTTCTATCTGCCGAGCATCCGGCAG
TCATTTACCCGGGAAACACGCAAGCACGCCATATAAAGGAGACGGGAGATAAAGGCTATTATCTCGTTCATGTGACAAAC
GGAGATATATCTTATGAATTTCAGAGAGCGCATGATGTCCTGTGGGAAAAAGCGGCGGTTGATGTGACGGAGGCAAAGAA
TATGACAGCCCTCTTCCAAATGGTGGAGGACACGTTTTCGAAGCTGCGGAAAAAGGGGAGCCCTGTTTGTGTAAGGCTTG
TTTTACAAGGGACGGCGCCGGAATGGCTGCTGGAGGCGCCAAAAGGCACCTTGGATGAGTTTCTTGAAGCTCTTCAGGAA
CAAGAAGCGGAAGAGGAACGTTTCGTTTGGCCTCTTAGATTGGACGATGAGACAGAAAACGAAGCAAACCTAACAAACCT
TGATCCTTTTTTTGGCGGTTTATTTGAAGACATTGATCGCAGCGATCTGTCAGACGTGCTGGAAGGGCTTGAGCGGCATC
CAGTGTATAGAAGGCACGCGGACCGGTTTAGCCAAGAGGAGGTAAAGGAAATAAAAGAGCAGGCACAGATAATATTGAAA
AGACAGCTTAAGGTGCTTGATACATGA

Upstream 100 bases:

>100_bases
AACAGCCTGGGGATTCTCAGGCTGTTTCTTTATTGACAGAACGTGCATTCGCAAGAATTCGGTGCTAAAATAAGGGTACT
TCATCCTGGAAAGGAGCAGA

Downstream 100 bases:

>100_bases
GGCGGTGACAGCTTTGCGAATTATATCTTTACATATCTACCAATACGGAAAATTTTCCAATCGGACCTTTGACTTTTCCG
CCTCTCCTGTCCAAGTCATC

Product: exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MLTDLTFIHAADLHLDSPFYGISHLPEPIFARIKESTFASVRHMIDAAVREHVDFILLAGDLFDEANRSLKAQLFLKKQF
ERLRECGISVYVIFGNHDHLGGEWTPIEWPENVHIFSSAVPEEKSFFKEGRRIASIYGFSYQARALMENQAARYRRSTDA
PFHIGMLHGTLSGSEGHDPYCPFTHDDLVKSGMDYWALGHIHKRQVLSAEHPAVIYPGNTQARHIKETGDKGYYLVHVTN
GDISYEFQRAHDVLWEKAAVDVTEAKNMTALFQMVEDTFSKLRKKGSPVCVRLVLQGTAPEWLLEAPKGTLDEFLEALQE
QEAEEERFVWPLRLDDETENEANLTNLDPFFGGLFEDIDRSDLSDVLEGLERHPVYRRHADRFSQEEVKEIKEQAQIILK
RQLKVLDT

Sequences:

>Translated_408_residues
MLTDLTFIHAADLHLDSPFYGISHLPEPIFARIKESTFASVRHMIDAAVREHVDFILLAGDLFDEANRSLKAQLFLKKQF
ERLRECGISVYVIFGNHDHLGGEWTPIEWPENVHIFSSAVPEEKSFFKEGRRIASIYGFSYQARALMENQAARYRRSTDA
PFHIGMLHGTLSGSEGHDPYCPFTHDDLVKSGMDYWALGHIHKRQVLSAEHPAVIYPGNTQARHIKETGDKGYYLVHVTN
GDISYEFQRAHDVLWEKAAVDVTEAKNMTALFQMVEDTFSKLRKKGSPVCVRLVLQGTAPEWLLEAPKGTLDEFLEALQE
QEAEEERFVWPLRLDDETENEANLTNLDPFFGGLFEDIDRSDLSDVLEGLERHPVYRRHADRFSQEEVKEIKEQAQIILK
RQLKVLDT
>Mature_408_residues
MLTDLTFIHAADLHLDSPFYGISHLPEPIFARIKESTFASVRHMIDAAVREHVDFILLAGDLFDEANRSLKAQLFLKKQF
ERLRECGISVYVIFGNHDHLGGEWTPIEWPENVHIFSSAVPEEKSFFKEGRRIASIYGFSYQARALMENQAARYRRSTDA
PFHIGMLHGTLSGSEGHDPYCPFTHDDLVKSGMDYWALGHIHKRQVLSAEHPAVIYPGNTQARHIKETGDKGYYLVHVTN
GDISYEFQRAHDVLWEKAAVDVTEAKNMTALFQMVEDTFSKLRKKGSPVCVRLVLQGTAPEWLLEAPKGTLDEFLEALQE
QEAEEERFVWPLRLDDETENEANLTNLDPFFGGLFEDIDRSDLSDVLEGLERHPVYRRHADRFSQEEVKEIKEQAQIILK
RQLKVLDT

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHAO_BACSU (O07522)

Other databases:

- EMBL:   Y14078
- EMBL:   AL009126
- PIR:   A69819
- RefSeq:   NP_388872.1
- ProteinModelPortal:   O07522
- SMR:   O07522
- EnsemblBacteria:   EBBACT00000003768
- GeneID:   936282
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09910
- NMPDR:   fig|224308.1.peg.991
- GenoList:   BSU09910
- GeneTree:   EBGT00050000002799
- HOGENOM:   HBG653855
- OMA:   SSAMNEC
- ProtClustDB:   CLSK886985
- BioCyc:   BSUB:BSU09910-MONOMER
- InterPro:   IPR004843
- InterPro:   IPR014576
- PIRSF:   PIRSF033091

Pfam domain/function: PF00149 Metallophos

EC number: NA

Molecular weight: Translated: 46811; Mature: 46811

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDLTFIHAADLHLDSPFYGISHLPEPIFARIKESTFASVRHMIDAAVREHVDFILLAG
CCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
DLFDEANRSLKAQLFLKKQFERLRECGISVYVIFGNHDHLGGEWTPIEWPENVHIFSSAV
HHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCC
PEEKSFFKEGRRIASIYGFSYQARALMENQAARYRRSTDAPFHIGMLHGTLSGSEGHDPY
CCHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCC
CPFTHDDLVKSGMDYWALGHIHKRQVLSAEHPAVIYPGNTQARHIKETGDKGYYLVHVTN
CCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCEEEEEEEC
GDISYEFQRAHDVLWEKAAVDVTEAKNMTALFQMVEDTFSKLRKKGSPVCVRLVLQGTAP
CCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
EWLLEAPKGTLDEFLEALQEQEAEEERFVWPLRLDDETENEANLTNLDPFFGGLFEDIDR
HHHHHCCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC
SDLSDVLEGLERHPVYRRHADRFSQEEVKEIKEQAQIILKRQLKVLDT
CHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTDLTFIHAADLHLDSPFYGISHLPEPIFARIKESTFASVRHMIDAAVREHVDFILLAG
CCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
DLFDEANRSLKAQLFLKKQFERLRECGISVYVIFGNHDHLGGEWTPIEWPENVHIFSSAV
HHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCC
PEEKSFFKEGRRIASIYGFSYQARALMENQAARYRRSTDAPFHIGMLHGTLSGSEGHDPY
CCHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCC
CPFTHDDLVKSGMDYWALGHIHKRQVLSAEHPAVIYPGNTQARHIKETGDKGYYLVHVTN
CCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCEEEEEEEC
GDISYEFQRAHDVLWEKAAVDVTEAKNMTALFQMVEDTFSKLRKKGSPVCVRLVLQGTAP
CCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
EWLLEAPKGTLDEFLEALQEQEAEEERFVWPLRLDDETENEANLTNLDPFFGGLFEDIDR
HHHHHCCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC
SDLSDVLEGLERHPVYRRHADRFSQEEVKEIKEQAQIILKRQLKVLDT
CHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377