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The map label for this gene is yheN

Identifier: 16078031

GI number: 16078031

Start: 1040861

End: 1041709

Strand: Reverse

Name: yheN

Synonym: BSU09660

Alternate gene names: 16078031

Gene position: 1041709-1040861 (Counterclockwise)

Preceding gene: 16078033

Following gene: 16078027

Centisome position: 24.71

GC content: 45.47

Gene sequence:

>849_bases
ATGCGACAAACGAGAGGAGAGGCTTCTCCTTCTGCAGTTTCGCTTGCTTTTAAATTTGCAAGTTTAGCAGTTTTATGTGT
GCTGCTTTTGCTTATGGTGATTTTGGGTTATTCCAACAGTTCAACGAAAGCAAAGGAAGTCACTGTCACAACAAACGGCC
AGCTTCGAGATGAGAAGGAAAGCCTTAAGCTGAAAAACGACTCCCCCGATCTCCTGATAAAACATCTGCAGACAAAGCAG
AACATGGGAGATAAAACGGTTTACTTAACCTTCGACGACGGCCCTTCAGCCGTTACAACCCGCTTGCTCGACGTACTGAA
AAGCGCTGATGTAAAAGCGACGTTTTTTATGCTGTCACCGCGGATGAACGAATTCAAGCAGGCTGTGAAAAGAGCAGAAA
AGGAAGGCCACGCACTCGGTTTACATGGCGTTACCCACAATAACAGATTGTTCTATCAAACACCGACATCTCCGCTAAAA
GAAATGCAGGAGGCGCGTGACACGCTGCAGGACATTACAGGATATAAAACCGATCTTGTCAGAACGCCATACGGAAGCAA
GCCGTCACTAACCGCCTCACAAATTCGCAATCTGGAGAAAGATGGGTTTGTGTACTGGGATTGGACGATCGACAGCATGG
ACTGGAAATACCGGAATTCACAGTATGTGACCGCCGTATTACAGCAGCTTGAGAATATGGAACACAGCTCTTCAAGCCGC
CCAAATGTAATTCTCATGCATGATCTTCCTGCTACTGTAAATGCGCTGCCGGTACTAATCAATAAATTAAAAGAAAAAGG
CTATTCCTTCGGAGTGTTAGAGGACACAATGGTTCCTGTTCATGAATAA

Upstream 100 bases:

>100_bases
TACTTGACTGGTAATACATAGGTTGTAAACATAAGGCATCTTCATAAGCTGCCTGCTGTACAGCATTATGTAGAGATTTT
ATGCCAATGGAGAGATTGTT

Downstream 100 bases:

>100_bases
AAAAGTGAGGCGCATAAAGCGGCTCACTTTTTCATGCCCAAACTTCGGGCAAACTCGCCGATTTTTTGATGGATGACCAT
GTCAAACAAGCTGTCGCAAT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRQTRGEASPSAVSLAFKFASLAVLCVLLLLMVILGYSNSSTKAKEVTVTTNGQLRDEKESLKLKNDSPDLLIKHLQTKQ
NMGDKTVYLTFDDGPSAVTTRLLDVLKSADVKATFFMLSPRMNEFKQAVKRAEKEGHALGLHGVTHNNRLFYQTPTSPLK
EMQEARDTLQDITGYKTDLVRTPYGSKPSLTASQIRNLEKDGFVYWDWTIDSMDWKYRNSQYVTAVLQQLENMEHSSSSR
PNVILMHDLPATVNALPVLINKLKEKGYSFGVLEDTMVPVHE

Sequences:

>Translated_282_residues
MRQTRGEASPSAVSLAFKFASLAVLCVLLLLMVILGYSNSSTKAKEVTVTTNGQLRDEKESLKLKNDSPDLLIKHLQTKQ
NMGDKTVYLTFDDGPSAVTTRLLDVLKSADVKATFFMLSPRMNEFKQAVKRAEKEGHALGLHGVTHNNRLFYQTPTSPLK
EMQEARDTLQDITGYKTDLVRTPYGSKPSLTASQIRNLEKDGFVYWDWTIDSMDWKYRNSQYVTAVLQQLENMEHSSSSR
PNVILMHDLPATVNALPVLINKLKEKGYSFGVLEDTMVPVHE
>Mature_282_residues
MRQTRGEASPSAVSLAFKFASLAVLCVLLLLMVILGYSNSSTKAKEVTVTTNGQLRDEKESLKLKNDSPDLLIKHLQTKQ
NMGDKTVYLTFDDGPSAVTTRLLDVLKSADVKATFFMLSPRMNEFKQAVKRAEKEGHALGLHGVTHNNRLFYQTPTSPLK
EMQEARDTLQDITGYKTDLVRTPYGSKPSLTASQIRNLEKDGFVYWDWTIDSMDWKYRNSQYVTAVLQQLENMEHSSSSR
PNVILMHDLPATVNALPVLINKLKEKGYSFGVLEDTMVPVHE

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=177, Percent_Identity=31.0734463276836, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHEN_BACSU (O07596)

Other databases:

- EMBL:   Y14082
- EMBL:   AL009126
- PIR:   F69829
- RefSeq:   NP_388847.1
- HSSP:   Q8DP63
- ProteinModelPortal:   O07596
- SMR:   O07596
- EnsemblBacteria:   EBBACT00000003956
- GeneID:   936280
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09660
- NMPDR:   fig|224308.1.peg.966
- GenoList:   BSU09660
- GeneTree:   EBGT00070000032106
- HOGENOM:   HBG751163
- OMA:   PAKGVAN
- PhylomeDB:   O07596
- ProtClustDB:   CLSK886973
- BioCyc:   BSUB:BSU09660-MONOMER
- InterPro:   IPR011330
- InterPro:   IPR002509
- Gene3D:   G3DSA:3.20.20.370

Pfam domain/function: PF01522 Polysacc_deac_1; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 31731; Mature: 31731

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xde55aac)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTRGEASPSAVSLAFKFASLAVLCVLLLLMVILGYSNSSTKAKEVTVTTNGQLRDEKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHH
SLKLKNDSPDLLIKHLQTKQNMGDKTVYLTFDDGPSAVTTRLLDVLKSADVKATFFMLSP
HCEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECC
RMNEFKQAVKRAEKEGHALGLHGVTHNNRLFYQTPTSPLKEMQEARDTLQDITGYKTDLV
CHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHEE
RTPYGSKPSLTASQIRNLEKDGFVYWDWTIDSMDWKYRNSQYVTAVLQQLENMEHSSSSR
ECCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCC
PNVILMHDLPATVNALPVLINKLKEKGYSFGVLEDTMVPVHE
CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MRQTRGEASPSAVSLAFKFASLAVLCVLLLLMVILGYSNSSTKAKEVTVTTNGQLRDEKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHH
SLKLKNDSPDLLIKHLQTKQNMGDKTVYLTFDDGPSAVTTRLLDVLKSADVKATFFMLSP
HCEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECC
RMNEFKQAVKRAEKEGHALGLHGVTHNNRLFYQTPTSPLKEMQEARDTLQDITGYKTDLV
CHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHEE
RTPYGSKPSLTASQIRNLEKDGFVYWDWTIDSMDWKYRNSQYVTAVLQQLENMEHSSSSR
ECCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCC
PNVILMHDLPATVNALPVLINKLKEKGYSFGVLEDTMVPVHE
CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377