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The map label for this gene is yhcW

Identifier: 16077989

GI number: 16077989

Start: 997724

End: 998386

Strand: Direct

Name: yhcW

Synonym: BSU09240

Alternate gene names: 16077989

Gene position: 997724-998386 (Clockwise)

Preceding gene: 16077988

Following gene: 255767215

Centisome position: 23.67

GC content: 45.55

Gene sequence:

>663_bases
GTGATTAAAGCGTTAATTTTTGATTTTGACGGGCTTATTCTAGATACAGAAACACACGAATATGAGGTTCTTCAGGAAAT
ATTTGAAGAGCACGGCTCAGTGCTGCCGCTATCTGTCTGGGGAAAGGTCATCGGAACTGCTGCGGGTTTCCGGCCTTTTG
AATATTTAGAAGAGCAGATCGGGAAAAAGCTGAACCATGAAGAGCTCACACAATTGAGAAGAGAGCGGTTTGCCAAACGC
ATGGAATCAGAAAAAGCGAGACCTGGTGTCGAAGCGTATTTGAATGCGGCAAAGGATTTAGGCTTAAAAATAGGCCTTGC
CTCCAGCTCTGATTATAAATGGGTGTCCGGCCATTTGAAGCAAATCGGCCTGTTTGATGATTTTGAAGTTATTCAAACGG
CGGATGATGTGGAAGAGGTGAAGCCGAATCCTGAACTCTATTTATTGGCGGCAAAGAACCTGGGGGTATCGCCAGCGGAA
TGTCTCGCGTTTGAGGATTCTGTCAATGGTTCGATTGCTGCGAAACGTGCAGGCATGAAGTGTGTCATTGTCCCGAATAA
AGTAACGGGTACCTTGATGTTTGAAGACTATGATCACAGGCTTGAATCAATGGCGGAGATGGAGCTCGCCCTATTGCTTG
ATCATCTGAACTCACAAAACTAG

Upstream 100 bases:

>100_bases
TCTTTCTTCACATAAAACCTTACTTTTTGAAAGCAGACTTGTTTCGGGGTATAGTGAGTGTATACATATGTCTCAATTCG
TACTAAAGGAGTTGTACCCA

Downstream 100 bases:

>100_bases
AAAGGAGCGAGTAGGTTGTCTGAGAAATTAGATTTGACCCGGTTTGAAAAGAAAATGGTTATCCGCAATATCGAAGAGAA
AGACATCGACAAGATTATCG

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQIGKKLNHEELTQLRRERFAKR
MESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHLKQIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAE
CLAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFEDYDHRLESMAEMELALLLDHLNSQN

Sequences:

>Translated_220_residues
MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQIGKKLNHEELTQLRRERFAKR
MESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHLKQIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAE
CLAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFEDYDHRLESMAEMELALLLDHLNSQN
>Mature_220_residues
MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQIGKKLNHEELTQLRRERFAKR
MESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHLKQIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAE
CLAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFEDYDHRLESMAEMELALLLDHLNSQN

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family

Homologues:

Organism=Homo sapiens, GI197382691, Length=192, Percent_Identity=31.7708333333333, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI207113149, Length=215, Percent_Identity=28.3720930232558, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI1788021, Length=223, Percent_Identity=30.4932735426009, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789046, Length=181, Percent_Identity=29.2817679558011, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787576, Length=204, Percent_Identity=26.9607843137255, Blast_Score=64, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17554716, Length=202, Percent_Identity=28.2178217821782, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17137324, Length=192, Percent_Identity=30.7291666666667, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI116008157, Length=197, Percent_Identity=32.994923857868, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHCW_BACSU (P54607)

Other databases:

- EMBL:   X96983
- EMBL:   AL009126
- PIR:   C69824
- RefSeq:   NP_388805.1
- ProteinModelPortal:   P54607
- SMR:   P54607
- EnsemblBacteria:   EBBACT00000001055
- GeneID:   936244
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09240
- NMPDR:   fig|224308.1.peg.924
- GenoList:   BSU09240
- GeneTree:   EBGT00050000000474
- HOGENOM:   HBG742904
- OMA:   ASSSDYK
- PhylomeDB:   P54607
- ProtClustDB:   CLSK2301442
- BioCyc:   BSUB:BSU09240-MONOMER
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- Gene3D:   G3DSA:3.40.50.1000
- PRINTS:   PR00413
- TIGRFAMs:   TIGR01549
- TIGRFAMs:   TIGR01509

Pfam domain/function: PF00702 Hydrolase; SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 24675; Mature: 24675

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQI
CCEEEEECCCCEEEECCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCHHHHHHHHH
GKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHLK
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHH
QIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMK
HCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEECCCCCCCHHHHCCCCE
CVIVPNKVTGTLMFEDYDHRLESMAEMELALLLDHLNSQN
EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQI
CCEEEEECCCCEEEECCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCHHHHHHHHH
GKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHLK
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHH
QIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMK
HCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEECCCCCCCHHHHCCCCE
CVIVPNKVTGTLMFEDYDHRLESMAEMELALLLDHLNSQN
EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377