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The map label for this gene is yhcS

Identifier: 16077985

GI number: 16077985

Start: 994998

End: 995594

Strand: Direct

Name: yhcS

Synonym: BSU09200

Alternate gene names: 16077985

Gene position: 994998-995594 (Clockwise)

Preceding gene: 16077984

Following gene: 255767214

Centisome position: 23.6

GC content: 44.72

Gene sequence:

>597_bases
GTGAAAAAAGTTATTCCACTATTCATCATTGCTGCCGGCCTAGTGATCGCAGGCTATGGAGGCTTTAAATTGATCGATAC
GAATACGAAAACGGAACAGACATTAAAAGAAGCAAAGCTGGCGGCTAAAAAGCCGCAGGAAGCTTCGGGGACGAAAAATA
GCACAGATCAAGCAAAGAACAAAGCATCATTTAAGCCTGAGACCGGCCAAGCGAGCGGCATTTTAGAAATACCGAAAATC
AATGCAGAGCTTCCGATCGTGGAGGGCACCGATGCTGATGATTTAGAAAAAGGTGTCGGGCATTACAAGGACAGCTATTA
TCCTGATGAAAACGGACAAATTGTGCTGTCAGGGCATCGGGATACCGTGTTTCGCCGGACGGGAGAGCTGGAAAAGGGGG
ATCAGCTCCGTCTTCTCCTGTCATATGGAGAATTCACATATGAAATTGTAAAAACAAAAATTGTCGATAAGGATGACACA
TCTATTATCACGCTCCAGCATGAAAAGGAAGAGCTGATTCTGACGACCTGCTATCCGTTTTCATACGTCGGAAATGCCCC
GAAGCGCTATATTATATATGGAAAACGAGTGACTTAA

Upstream 100 bases:

>100_bases
ATACGTCAGCGGGCTACTATAACTTTATGGTAATCGGTGCGGCGGTGACATTGTCAGGAACTTATCTATATGTCAGAAGA
AAAAGGAGCGCCTCCAGAAC

Downstream 100 bases:

>100_bases
AAAGCCGAGGCAGTGCCTGCGGCTTTTCTTCATGAAAAATATGTGCGGCAAAGGTTTTTCATATCAGCAGGGAAAGGGGC
TTCAGCAACTATGAGCTCGT

Product: secreted enzyme; sortase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKKVIPLFIIAAGLVIAGYGGFKLIDTNTKTEQTLKEAKLAAKKPQEASGTKNSTDQAKNKASFKPETGQASGILEIPKI
NAELPIVEGTDADDLEKGVGHYKDSYYPDENGQIVLSGHRDTVFRRTGELEKGDQLRLLLSYGEFTYEIVKTKIVDKDDT
SIITLQHEKEELILTTCYPFSYVGNAPKRYIIYGKRVT

Sequences:

>Translated_198_residues
MKKVIPLFIIAAGLVIAGYGGFKLIDTNTKTEQTLKEAKLAAKKPQEASGTKNSTDQAKNKASFKPETGQASGILEIPKI
NAELPIVEGTDADDLEKGVGHYKDSYYPDENGQIVLSGHRDTVFRRTGELEKGDQLRLLLSYGEFTYEIVKTKIVDKDDT
SIITLQHEKEELILTTCYPFSYVGNAPKRYIIYGKRVT
>Mature_198_residues
MKKVIPLFIIAAGLVIAGYGGFKLIDTNTKTEQTLKEAKLAAKKPQEASGTKNSTDQAKNKASFKPETGQASGILEIPKI
NAELPIVEGTDADDLEKGVGHYKDSYYPDENGQIVLSGHRDTVFRRTGELEKGDQLRLLLSYGEFTYEIVKTKIVDKDDT
SIITLQHEKEELILTTCYPFSYVGNAPKRYIIYGKRVT

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHCS_BACSU (P54603)

Other databases:

- EMBL:   X96983
- EMBL:   AL009126
- PIR:   G69823
- RefSeq:   NP_388801.1
- ProteinModelPortal:   P54603
- SMR:   P54603
- EnsemblBacteria:   EBBACT00000001074
- GeneID:   939748
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09200
- NMPDR:   fig|224308.1.peg.920
- GenoList:   BSU09200
- GeneTree:   EBGT00070000031805
- HOGENOM:   HBG345751
- OMA:   RYIIYGK
- ProtClustDB:   CLSK886942
- BioCyc:   BSUB:BSU09200-MONOMER
- InterPro:   IPR005754
- TIGRFAMs:   TIGR01076

Pfam domain/function: PF04203 Sortase

EC number: NA

Molecular weight: Translated: 21976; Mature: 21976

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xda7a5c8)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIPLFIIAAGLVIAGYGGFKLIDTNTKTEQTLKEAKLAAKKPQEASGTKNSTDQAKN
CCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
KASFKPETGQASGILEIPKINAELPIVEGTDADDLEKGVGHYKDSYYPDENGQIVLSGHR
CCCCCCCCCCCCCEEECCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCC
DTVFRRTGELEKGDQLRLLLSYGEFTYEIVKTKIVDKDDTSIITLQHEKEELILTTCYPF
CEEHHHCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEECCH
SYVGNAPKRYIIYGKRVT
HHCCCCCCEEEEEEEECH
>Mature Secondary Structure
MKKVIPLFIIAAGLVIAGYGGFKLIDTNTKTEQTLKEAKLAAKKPQEASGTKNSTDQAKN
CCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
KASFKPETGQASGILEIPKINAELPIVEGTDADDLEKGVGHYKDSYYPDENGQIVLSGHR
CCCCCCCCCCCCCEEECCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCC
DTVFRRTGELEKGDQLRLLLSYGEFTYEIVKTKIVDKDDTSIITLQHEKEELILTTCYPF
CEEHHHCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEECCH
SYVGNAPKRYIIYGKRVT
HHCCCCCCEEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377