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The map label for this gene is yhcB

Identifier: 16077967

GI number: 16077967

Start: 979396

End: 979926

Strand: Direct

Name: yhcB

Synonym: BSU09020

Alternate gene names: 16077967

Gene position: 979396-979926 (Clockwise)

Preceding gene: 16077966

Following gene: 16077968

Centisome position: 23.23

GC content: 48.4

Gene sequence:

>531_bases
ATGAAAATTTATGTAGTGTATGATAGTGAAGGCGAACATACTAAAGTGCTTGCAGAAGCGATTGCTGAAGGCGCGAGAGA
AAACGACGCGGCTGAAGTGTTCATCGACCATGTAGATCAGGCTGATATCCGCAAGCTTAAAGATATGGATGCGATTATTT
GGGGATGCCCAGGGCATTTCGGAACAATCAGCTCCGGTCTTAAAACTTGGATCGACAGACTTGGCTACTTGTGGGCTGAA
GGCGAGCTGATCAACAAAGTCGGTGCTGTCTTCTGCACAACGGCAACAACACACGGCGGCTTGGAAATGACAATGCACAA
TTTAATCACGCCGATGTTCCACCAAGGCATGATTGTTGTCGGACTGCCTGGCAACGTGCCTGAAAACGCACTTTATGGCT
CTTATTACGGAGCAGGTGTCACTTGTCCGGTAGACAGTGATGAGTTAATGTCTGAGGAAGGTATTCAGCTTGGACGCGCG
TTGGGAAGACGTGTCAGCCAAGTCACAGGAAACCTAACAGCAGGACAGTAA

Upstream 100 bases:

>100_bases
AGAAAAGATAAATTGCGTAAGAAGAAAAAAGAGGAGCTTTCATTACTTCCTGCTCCAAAAGAAGCTAAGGAATCTTAATC
TGTACAGGGAGGTTTCCTGA

Downstream 100 bases:

>100_bases
GGAGAGGTTGAAATGGCCATTATTATAGCAATAATTGCTGCTGTCATTGTCATTGCGGCCCTTATTACATTTAACGTCCG
CAACGCCTCACCTGGACCTG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKIYVVYDSEGEHTKVLAEAIAEGARENDAAEVFIDHVDQADIRKLKDMDAIIWGCPGHFGTISSGLKTWIDRLGYLWAE
GELINKVGAVFCTTATTHGGLEMTMHNLITPMFHQGMIVVGLPGNVPENALYGSYYGAGVTCPVDSDELMSEEGIQLGRA
LGRRVSQVTGNLTAGQ

Sequences:

>Translated_176_residues
MKIYVVYDSEGEHTKVLAEAIAEGARENDAAEVFIDHVDQADIRKLKDMDAIIWGCPGHFGTISSGLKTWIDRLGYLWAE
GELINKVGAVFCTTATTHGGLEMTMHNLITPMFHQGMIVVGLPGNVPENALYGSYYGAGVTCPVDSDELMSEEGIQLGRA
LGRRVSQVTGNLTAGQ
>Mature_176_residues
MKIYVVYDSEGEHTKVLAEAIAEGARENDAAEVFIDHVDQADIRKLKDMDAIIWGCPGHFGTISSGLKTWIDRLGYLWAE
GELINKVGAVFCTTATTHGGLEMTMHNLITPMFHQGMIVVGLPGNVPENALYGSYYGAGVTCPVDSDELMSEEGIQLGRA
LGRRVSQVTGNLTAGQ

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain

Homologues:

Organism=Escherichia coli, GI1787239, Length=191, Percent_Identity=32.4607329842932, Blast_Score=90, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHCB_BACSU (P54586)

Other databases:

- EMBL:   X96983
- EMBL:   AL009126
- PIR:   F69821
- RefSeq:   NP_388783.1
- ProteinModelPortal:   P54586
- SMR:   P54586
- EnsemblBacteria:   EBBACT00000002044
- GeneID:   939734
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09020
- NMPDR:   fig|224308.1.peg.902
- GenoList:   BSU09020
- GeneTree:   EBGT00050000002038
- HOGENOM:   HBG686708
- OMA:   WEEGSLA
- PhylomeDB:   P54586
- ProtClustDB:   CLSK886928
- BioCyc:   BSUB:BSU09020-MONOMER
- InterPro:   IPR008254

Pfam domain/function: PF00258 Flavodoxin_1

EC number: NA

Molecular weight: Translated: 19016; Mature: 19016

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYVVYDSEGEHTKVLAEAIAEGARENDAAEVFIDHVDQADIRKLKDMDAIIWGCPGHF
CEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCEEEECCCCCC
GTISSGLKTWIDRLGYLWAEGELINKVGAVFCTTATTHGGLEMTMHNLITPMFHQGMIVV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCEEEE
GLPGNVPENALYGSYYGAGVTCPVDSDELMSEEGIQLGRALGRRVSQVTGNLTAGQ
ECCCCCCCCCEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIYVVYDSEGEHTKVLAEAIAEGARENDAAEVFIDHVDQADIRKLKDMDAIIWGCPGHF
CEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCEEEECCCCCC
GTISSGLKTWIDRLGYLWAEGELINKVGAVFCTTATTHGGLEMTMHNLITPMFHQGMIVV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCEEEE
GLPGNVPENALYGSYYGAGVTCPVDSDELMSEEGIQLGRALGRRVSQVTGNLTAGQ
ECCCCCCCCCEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377