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The map label for this gene is yfhC

Identifier: 16077915

GI number: 16077915

Start: 923587

End: 924171

Strand: Direct

Name: yfhC

Synonym: BSU08480

Alternate gene names: 16077915

Gene position: 923587-924171 (Clockwise)

Preceding gene: 16077914

Following gene: 16077919

Centisome position: 21.91

GC content: 44.79

Gene sequence:

>585_bases
ATGCCTCAAACCGAACAAATACATCAGCATTCAGTACTGAGGGACATCATACGCAGCAGAAGATCGATTCGAAAGTTTAA
ACAAGAGCCAGTACCTTCAGCAGTCATTCTTGACATGCTTGAAACGGCAAAATATGCGCCAAATCACAGAGTGACAGAGC
CATGGAGATTTATTTACGTTTCCAGTGAGACAGGTAAAGCGAACCTCATTAATACATTTGCAGCGTTCTCTAAGAAATCC
AAGCCGGATATGACAGAGGAAAAGCTTCAAAATTTCAAAAACACACTTGGGCGCGTTCCGGGATTTCTCCTCGTCGTGTT
TCAGGAAGATGAAAACGAAAGAGCGCGGGACGACGATTTTGCGGCAACAAGCTCGTTGATTCAAAATCTTCAGCTTCTCG
CTTGGGAAAAAGGAATCGGCATGGTTTGGAAAAGCGGAAAAATCCTTTATGACAAAGAAGTCCATCAGGCCTTTGGTTTA
CAGGATAATGAGCGTTTCGCCGCCATCATACAAACAGGTTATCCTGACGAGGCGCCGGAAGTGAAAAAACGCACACCGAT
CCGCGACCGATTCACTGAAATGTAA

Upstream 100 bases:

>100_bases
TCTTAAAATCTAATACGGATGATGGTTTACAAAAAGATGCACTTTCCGTTATCATTATGAAATGATAATCATTTTCAATT
GCATAGGAAGGTGAGACGGT

Downstream 100 bases:

>100_bases
AAAACCCCTTGTCTCAAACGGAGACAAGGGGTTTTTCATTAACGAGATTTCTTTTTCGCTCTGTTGTCGGCTGCTTTCGC
ACGCTCTTGCGCTTCGCGGT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPQTEQIHQHSVLRDIIRSRRSIRKFKQEPVPSAVILDMLETAKYAPNHRVTEPWRFIYVSSETGKANLINTFAAFSKKS
KPDMTEEKLQNFKNTLGRVPGFLLVVFQEDENERARDDDFAATSSLIQNLQLLAWEKGIGMVWKSGKILYDKEVHQAFGL
QDNERFAAIIQTGYPDEAPEVKKRTPIRDRFTEM

Sequences:

>Translated_194_residues
MPQTEQIHQHSVLRDIIRSRRSIRKFKQEPVPSAVILDMLETAKYAPNHRVTEPWRFIYVSSETGKANLINTFAAFSKKS
KPDMTEEKLQNFKNTLGRVPGFLLVVFQEDENERARDDDFAATSSLIQNLQLLAWEKGIGMVWKSGKILYDKEVHQAFGL
QDNERFAAIIQTGYPDEAPEVKKRTPIRDRFTEM
>Mature_193_residues
PQTEQIHQHSVLRDIIRSRRSIRKFKQEPVPSAVILDMLETAKYAPNHRVTEPWRFIYVSSETGKANLINTFAAFSKKSK
PDMTEEKLQNFKNTLGRVPGFLLVVFQEDENERARDDDFAATSSLIQNLQLLAWEKGIGMVWKSGKILYDKEVHQAFGLQ
DNERFAAIIQTGYPDEAPEVKKRTPIRDRFTEM

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFHC_BACSU (O31571)

Other databases:

- EMBL:   D85082
- EMBL:   AL009126
- PIR:   D69800
- RefSeq:   NP_388729.1
- ProteinModelPortal:   O31571
- SMR:   O31571
- EnsemblBacteria:   EBBACT00000000500
- GeneID:   939221
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08480
- NMPDR:   fig|224308.1.peg.848
- GenoList:   BSU08480
- GeneTree:   EBGT00050000001302
- HOGENOM:   HBG751302
- OMA:   NTILEQA
- ProtClustDB:   CLSK886904
- BioCyc:   BSUB:BSU08480-MONOMER
- InterPro:   IPR000415

Pfam domain/function: PF00881 Nitroreductase; SSF55469 Nitroreductase

EC number: NA

Molecular weight: Translated: 22455; Mature: 22324

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: BINDING 188-188

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQTEQIHQHSVLRDIIRSRRSIRKFKQEPVPSAVILDMLETAKYAPNHRVTEPWRFIYV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE
SSETGKANLINTFAAFSKKSKPDMTEEKLQNFKNTLGRVPGFLLVVFQEDENERARDDDF
ECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHH
AATSSLIQNLQLLAWEKGIGMVWKSGKILYDKEVHQAFGLQDNERFAAIIQTGYPDEAPE
HHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
VKKRTPIRDRFTEM
HHHCCCHHHHHCCC
>Mature Secondary Structure 
PQTEQIHQHSVLRDIIRSRRSIRKFKQEPVPSAVILDMLETAKYAPNHRVTEPWRFIYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE
SSETGKANLINTFAAFSKKSKPDMTEEKLQNFKNTLGRVPGFLLVVFQEDENERARDDDF
ECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHH
AATSSLIQNLQLLAWEKGIGMVWKSGKILYDKEVHQAFGLQDNERFAAIIQTGYPDEAPE
HHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
VKKRTPIRDRFTEM
HHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377