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The map label for this gene is ydiL

Identifier: 16077668

GI number: 16077668

Start: 648930

End: 649664

Strand: Reverse

Name: ydiL

Synonym: BSU06010

Alternate gene names: 16077668

Gene position: 649664-648930 (Counterclockwise)

Preceding gene: 16077681

Following gene: 16077667

Centisome position: 15.41

GC content: 40.82

Gene sequence:

>735_bases
TTGAGAAAACAGTATTGGTTTATTATTTTGACATATATCATCATGCAGTTTTCCGCATTAATCGCGATTCCCTTGTTATT
TAAATTCGGTTATGCCGGAGGACAGCCTACAGATGAAAATATGCTGCATGCACAAGGATTATGGTCCGTTATCAGCTTTA
TCGCCTGTCTCGTTGTTGTTCTGCTCATTCTGAGAACCGTTCCGAAAGAAACGCTGCGAAACGGACAGAAGGACTCAATC
GGACTTTCTATCCTTTGGGCGATAGCCGGTTTTTTCATTGCCCTTTTCTCTCAAGGAATAGCAGGCTCTATTGAATATTA
TGTTTTTGGCATCGGAAGAGAATCAGAAAATACACAAGCGATTCTGGATGTCATTCAGGCAGTCCCGCTCATGATTATCG
TTTCTTCCATCGTCGGGCCTATATTAGAAGAAATCATCTTCAGAAAAATCATTTTCGGCGCGCTGTACGAAAAAACGAAT
TTCTTTTTCGCAGGACTGATCAGCTCGGTTATCTTCGGTATTGTTCACGCTGATTTGAAGCATCTCCTTCTATATACAGC
AATGGGCTTTACCTTTGCCTTTTTATATGCGAGAACAAAACGGATATGGGTGCCGATTTTCGCCCATTTAATGATGAATA
CATTCGTCGTCATCATGCAGCTTGAGCCTGTTCGTAATTACCTTGAACAGCAGAGCACACAAATGCAATTGATTATTGGA
GGATTATTTTTATGA

Upstream 100 bases:

>100_bases
TTTTCCGCTCCCTTTTCCGTTAGCTTTTTCACCCCCGTACCGATTATGTTACAATAGCTGTAGATGAACGAAACCCACTT
AACAAAGGAGTACATACCAT

Downstream 100 bases:

>100_bases
GAAACCCGGTAGTTTGGGGAATGATCTACTTTGCCGTAGGGTGCATCTTTACTTATCTTGCCGCAAGCTCGCCAGGCAGC
ATGTGGTCATTTTACTCCAT

Product: membrane protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRKQYWFIILTYIIMQFSALIAIPLLFKFGYAGGQPTDENMLHAQGLWSVISFIACLVVVLLILRTVPKETLRNGQKDSI
GLSILWAIAGFFIALFSQGIAGSIEYYVFGIGRESENTQAILDVIQAVPLMIIVSSIVGPILEEIIFRKIIFGALYEKTN
FFFAGLISSVIFGIVHADLKHLLLYTAMGFTFAFLYARTKRIWVPIFAHLMMNTFVVIMQLEPVRNYLEQQSTQMQLIIG
GLFL

Sequences:

>Translated_244_residues
MRKQYWFIILTYIIMQFSALIAIPLLFKFGYAGGQPTDENMLHAQGLWSVISFIACLVVVLLILRTVPKETLRNGQKDSI
GLSILWAIAGFFIALFSQGIAGSIEYYVFGIGRESENTQAILDVIQAVPLMIIVSSIVGPILEEIIFRKIIFGALYEKTN
FFFAGLISSVIFGIVHADLKHLLLYTAMGFTFAFLYARTKRIWVPIFAHLMMNTFVVIMQLEPVRNYLEQQSTQMQLIIG
GLFL
>Mature_244_residues
MRKQYWFIILTYIIMQFSALIAIPLLFKFGYAGGQPTDENMLHAQGLWSVISFIACLVVVLLILRTVPKETLRNGQKDSI
GLSILWAIAGFFIALFSQGIAGSIEYYVFGIGRESENTQAILDVIQAVPLMIIVSSIVGPILEEIIFRKIIFGALYEKTN
FFFAGLISSVIFGIVHADLKHLLLYTAMGFTFAFLYARTKRIWVPIFAHLMMNTFVVIMQLEPVRNYLEQQSTQMQLIIG
GLFL

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U48 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDIL_BACSU (O05525)

Other databases:

- EMBL:   D88802
- EMBL:   AL009126
- PIR:   E69787
- RefSeq:   NP_388482.1
- ProteinModelPortal:   O05525
- EnsemblBacteria:   EBBACT00000001794
- GeneID:   938033
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU06010
- NMPDR:   fig|224308.1.peg.601
- GenoList:   BSU06010
- GeneTree:   EBGT00050000001081
- HOGENOM:   HBG533898
- OMA:   GFTFAFL
- ProtClustDB:   CLSK2391264
- BioCyc:   BSUB:BSU06010-MONOMER
- InterPro:   IPR003675

Pfam domain/function: PF02517 Abi

EC number: NA

Molecular weight: Translated: 27590; Mature: 27590

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd0c6c78)-; HASH(0xca473b0)-; HASH(0xd5ae368)-; HASH(0xca900c4)-; HASH(0xd59ae64)-; HASH(0xd65815c)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQYWFIILTYIIMQFSALIAIPLLFKFGYAGGQPTDENMLHAQGLWSVISFIACLVVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLILRTVPKETLRNGQKDSIGLSILWAIAGFFIALFSQGIAGSIEYYVFGIGRESENTQA
HHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHH
ILDVIQAVPLMIIVSSIVGPILEEIIFRKIIFGALYEKTNFFFAGLISSVIFGIVHADLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLLYTAMGFTFAFLYARTKRIWVPIFAHLMMNTFVVIMQLEPVRNYLEQQSTQMQLIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFL
HHCH
>Mature Secondary Structure
MRKQYWFIILTYIIMQFSALIAIPLLFKFGYAGGQPTDENMLHAQGLWSVISFIACLVVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLILRTVPKETLRNGQKDSIGLSILWAIAGFFIALFSQGIAGSIEYYVFGIGRESENTQA
HHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHH
ILDVIQAVPLMIIVSSIVGPILEEIIFRKIIFGALYEKTNFFFAGLISSVIFGIVHADLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLLYTAMGFTFAFLYARTKRIWVPIFAHLMMNTFVVIMQLEPVRNYLEQQSTQMQLIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFL
HHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377