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The map label for this gene is nin

Identifier: 16077411

GI number: 16077411

Start: 371729

End: 372127

Strand: Reverse

Name: nin

Synonym: BSU03420

Alternate gene names: 16077411

Gene position: 372127-371729 (Counterclockwise)

Preceding gene: 50812179

Following gene: 16077407

Centisome position: 8.83

GC content: 39.85

Gene sequence:

>399_bases
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Upstream 100 bases:

>100_bases
GAGCAGGCTCTTGGGTCGGGCATCGGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAAACAGTA
CATAGAGGAGGAACAGCACA

Downstream 100 bases:

>100_bases
TGAAAAACCCCTGAGAGAATAACTCTCAGGGACTCTTTATAAACTTTCTCCGTTTGTCTTGATGACATCTTGATACCAAT
AAAAGCTTTTTTTCTTCAAG

Product: inhibitor of the DNA degrading activity of NucA (competence)

Products: NA

Alternate protein names: Competence protein J

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Sequences:

>Translated_132_residues
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
>Mature_132_residues
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Specific function: Plays a role in the competence of cells to be transformed. It inhibits the activity of the DNA-entry nuclease

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIN_BACSU (P12669)

Other databases:

- EMBL:   M21672
- EMBL:   D30762
- EMBL:   D50453
- EMBL:   AL009126
- PIR:   B31100
- RefSeq:   NP_388224.1
- EnsemblBacteria:   EBBACT00000003799
- GeneID:   938312
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU03420
- NMPDR:   fig|224308.1.peg.343
- GenoList:   BSU03420
- GeneTree:   EBGT00050000001034
- HOGENOM:   HBG338350
- OMA:   IFEAISD
- ProtClustDB:   CLSK886672
- BioCyc:   BSUB:BSU03420-MONOMER
- InterPro:   IPR020354
- ProDom:   PD081734

Pfam domain/function: PF11033 ComJ

EC number: NA

Molecular weight: Translated: 14997; Mature: 14997

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFIL
CCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEE
FRLNSSETVNSYEKKVTVPFHVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDL
EEECCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCC
HADTYIIDAVSV
CCCEEEEEEECC
>Mature Secondary Structure
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFIL
CCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEE
FRLNSSETVNSYEKKVTVPFHVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDL
EEECCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCC
HADTYIIDAVSV
CCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2841296; 7704255; 8969502; 9384377; 7746143