Click here to switch to the map view.

The map label for this gene is nasE

Identifier: 16077398

GI number: 16077398

Start: 355412

End: 355732

Strand: Reverse

Name: nasE

Synonym: BSU03290

Alternate gene names: 16077398

Gene position: 355732-355412 (Counterclockwise)

Preceding gene: 16077399

Following gene: 16077397

Centisome position: 8.44

GC content: 44.55

Gene sequence:

>321_bases
ATGGTAAACAAAGACGTAACAAAAGTATGTATCGGAAAAATTGAAGAATTGCCTGAACAATTAGGCAAAACAGTGTATAT
TGAAGATAAGGAGCTCGCGGTTTTCAAGCTTTCAGACGGAAGCATCCGCGCCATTGAAAACCGCTGTCCGCATAAGGGCG
GCGTCCTGGCAGAAGGCATCGTCAGCGGTCAATATGTTTTCTGCCCGATGCACGACTGGAAAATTTCCTTAGAAGACGGA
ATCGTCCAAGAACCTGACCACGGATGCGTCAAAACATATGAAACGCTGATCGAAGGAGAACATGTTTATCTCGTATATTG
A

Upstream 100 bases:

>100_bases
TGGAAAGACTTTTTAGAGGATAAACAAACCTCTAAAGAATTATTTGAAAATGTCGTGACCACATCATAATGACAAAAACT
ATCATTGAGGAGGAATGGAC

Downstream 100 bases:

>100_bases
TCAAAAGACCGGATCACTTTTCTAGTGGTCCTTCATTTTTTACAGTGACGGAAGGATGACATGATCATGAAGAACGGAAT
CGTATATTTCGTGGGAGCCG

Product: assimilatory nitrite reductase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MVNKDVTKVCIGKIEELPEQLGKTVYIEDKELAVFKLSDGSIRAIENRCPHKGGVLAEGIVSGQYVFCPMHDWKISLEDG
IVQEPDHGCVKTYETLIEGEHVYLVY

Sequences:

>Translated_106_residues
MVNKDVTKVCIGKIEELPEQLGKTVYIEDKELAVFKLSDGSIRAIENRCPHKGGVLAEGIVSGQYVFCPMHDWKISLEDG
IVQEPDHGCVKTYETLIEGEHVYLVY
>Mature_106_residues
MVNKDVTKVCIGKIEELPEQLGKTVYIEDKELAVFKLSDGSIRAIENRCPHKGGVLAEGIVSGQYVFCPMHDWKISLEDG
IVQEPDHGCVKTYETLIEGEHVYLVY

Specific function: Required for nitrite assimilation. Required for activity of the reductase

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NASE_BACSU (P42436)

Other databases:

- EMBL:   D30689
- EMBL:   D50453
- EMBL:   AL009126
- PIR:   I40030
- RefSeq:   NP_388211.1
- ProteinModelPortal:   P42436
- SMR:   P42436
- EnsemblBacteria:   EBBACT00000001180
- GeneID:   938331
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU03290
- NMPDR:   fig|224308.1.peg.330
- GenoList:   BSU03290
- GeneTree:   EBGT00050000002982
- HOGENOM:   HBG668715
- OMA:   EKIKVMR
- ProtClustDB:   CLSK886668
- BioCyc:   BSUB:BSU03290-MONOMER
- BRENDA:   1.7.1.4
- GO:   GO:0005737
- InterPro:   IPR012748
- InterPro:   IPR017941
- Gene3D:   G3DSA:2.102.10.10
- TIGRFAMs:   TIGR02378

Pfam domain/function: PF00355 Rieske; SSF50022 Rieske_dom

EC number: =1.7.1.4

Molecular weight: Translated: 11895; Mature: 11895

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS51296 RIESKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKDVTKVCIGKIEELPEQLGKTVYIEDKELAVFKLSDGSIRAIENRCPHKGGVLAEGI
CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCEEEEHHCCCCCCCEEECCC
VSGQYVFCPMHDWKISLEDGIVQEPDHGCVKTYETLIEGEHVYLVY
CCCCEEEEECCCCEEECCCCCEECCCCCHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MVNKDVTKVCIGKIEELPEQLGKTVYIEDKELAVFKLSDGSIRAIENRCPHKGGVLAEGI
CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCEEEEHHCCCCCCCEEECCC
VSGQYVFCPMHDWKISLEDGIVQEPDHGCVKTYETLIEGEHVYLVY
CCCCEEEEECCCCEEECCCCCEECCCCCHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7868621; 8969502; 9384377