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The map label for this gene is natR

Identifier: 16077343

GI number: 16077343

Start: 295584

End: 296285

Strand: Reverse

Name: natR

Synonym: BSU02740

Alternate gene names: 16077343

Gene position: 296285-295584 (Counterclockwise)

Preceding gene: 16077347

Following gene: 16077342

Centisome position: 7.03

GC content: 43.02

Gene sequence:

>702_bases
ATGGTAAAAGTCGGACTTGTAGATGATTATCGAGTAGATTTAGAGAAGTTAGAAGCGATCGTGTCCAGAATGCAGGACGT
CGAAATTGTCTTTTCCACCGATTCAGCGAAGGAAGCCTACAGGCGGGTAAAGAACGGAGACATTGATCTGCTGCTTGCCG
ATATCGAGATGCCCCATATGTCTGGCTACGAGCTTGCTGATTTGATCAAATCCCATTCACTTGATGTGGATGTGATTTTT
GTTACCGGCCACGGCGGTTATGCGGTTCACGCCTTTGACCTGAACGTCCATGATTATATTATGAAGCCGTACTATGCCGA
CCGTCTGGCCGCTTCCTTCGACCGGTACTTGAAAAAGAAAACGGAAACGAGTTTGAATGGGCGTATATTGATAAAGCAAA
AGTCTGAAATGCACGTCCTGCAAAAGAAGGATATTATTTTCGCAGAACGGACGGGACGTTCGACGACGATTGTGACAACC
GCCGAAGAGGTGCAAACGTATCAAACATTAAATGATATTAAAGGCGACCTGCCCGAAAAAGATTTTCTTCGTTCGCATCG
TTCCTTTATTATCAACATTCATTACATAAAGCATTTTTCCGCTTATACCAAGCATTCATTCACAGTTTCCTTTGAGGGAA
CGTCTAAAAAAGCGATGATCACTAAGCAGCAGCTTGATTATTTTCAAAACTACTATTTTTGA

Upstream 100 bases:

>100_bases
GAAAAGCTGGATTAGTTGGATAAAGTTGTCGCGAAGAGTTCTTTTTATGTCGTGAAATGGGATAGAATAAAGATGATTCT
ATGTAACTAGGGGAATGATA

Downstream 100 bases:

>100_bases
GGAGTTTAGTACGTGATTACCCTTTTTCAATGTCTTTATCTGATTTTATTTAGTTTCATATGTTATCAGGGAGCTGCTGC
TTTTTCACACAGCACAGCCG

Product: two-component response regulator NatK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVKVGLVDDYRVDLEKLEAIVSRMQDVEIVFSTDSAKEAYRRVKNGDIDLLLADIEMPHMSGYELADLIKSHSLDVDVIF
VTGHGGYAVHAFDLNVHDYIMKPYYADRLAASFDRYLKKKTETSLNGRILIKQKSEMHVLQKKDIIFAERTGRSTTIVTT
AEEVQTYQTLNDIKGDLPEKDFLRSHRSFIINIHYIKHFSAYTKHSFTVSFEGTSKKAMITKQQLDYFQNYYF

Sequences:

>Translated_233_residues
MVKVGLVDDYRVDLEKLEAIVSRMQDVEIVFSTDSAKEAYRRVKNGDIDLLLADIEMPHMSGYELADLIKSHSLDVDVIF
VTGHGGYAVHAFDLNVHDYIMKPYYADRLAASFDRYLKKKTETSLNGRILIKQKSEMHVLQKKDIIFAERTGRSTTIVTT
AEEVQTYQTLNDIKGDLPEKDFLRSHRSFIINIHYIKHFSAYTKHSFTVSFEGTSKKAMITKQQLDYFQNYYF
>Mature_233_residues
MVKVGLVDDYRVDLEKLEAIVSRMQDVEIVFSTDSAKEAYRRVKNGDIDLLLADIEMPHMSGYELADLIKSHSLDVDVIF
VTGHGGYAVHAFDLNVHDYIMKPYYADRLAASFDRYLKKKTETSLNGRILIKQKSEMHVLQKKDIIFAERTGRSTTIVTT
AEEVQTYQTLNDIKGDLPEKDFLRSHRSFIINIHYIKHFSAYTKHSFTVSFEGTSKKAMITKQQLDYFQNYYF

Specific function: Could be member of the two-component regulatory system yccG/yccH

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

Organism=Escherichia coli, GI1788724, Length=239, Percent_Identity=22.1757322175732, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082052, Length=209, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCCH_BACSU (P70955)

Other databases:

- EMBL:   U30873
- EMBL:   AB000617
- EMBL:   AL009126
- PIR:   A69755
- RefSeq:   NP_388156.1
- ProteinModelPortal:   P70955
- SMR:   P70955
- EnsemblBacteria:   EBBACT00000003399
- GeneID:   938379
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU02740
- NMPDR:   fig|224308.1.peg.275
- GenoList:   BSU02740
- GeneTree:   EBGT00050000000047
- HOGENOM:   HBG345166
- OMA:   TIHTINE
- PhylomeDB:   P70955
- ProtClustDB:   CLSK886636
- BioCyc:   BSUB:BSU02740-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789
- SMART:   SM00850
- SMART:   SM00448

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg; SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 26969; Mature: 26969

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS50930 HTH_LYTTR; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVGLVDDYRVDLEKLEAIVSRMQDVEIVFSTDSAKEAYRRVKNGDIDLLLADIEMPHM
CEEECCCCCHHHCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCC
SGYELADLIKSHSLDVDVIFVTGHGGYAVHAFDLNVHDYIMKPYYADRLAASFDRYLKKK
CCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHH
TETSLNGRILIKQKSEMHVLQKKDIIFAERTGRSTTIVTTAEEVQTYQTLNDIKGDLPEK
HCCCCCCEEEEEECCHHHHHHHCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCCH
DFLRSHRSFIINIHYIKHFSAYTKHSFTVSFEGTSKKAMITKQQLDYFQNYYF
HHHHCCCEEEEEEEEHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKVGLVDDYRVDLEKLEAIVSRMQDVEIVFSTDSAKEAYRRVKNGDIDLLLADIEMPHM
CEEECCCCCHHHCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCC
SGYELADLIKSHSLDVDVIFVTGHGGYAVHAFDLNVHDYIMKPYYADRLAASFDRYLKKK
CCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHH
TETSLNGRILIKQKSEMHVLQKKDIIFAERTGRSTTIVTTAEEVQTYQTLNDIKGDLPEK
HCCCCCCEEEEEECCHHHHHHHCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCCH
DFLRSHRSFIINIHYIKHFSAYTKHSFTVSFEGTSKKAMITKQQLDYFQNYYF
HHHHCCCEEEEEEEEHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9106203; 9274031; 9384377