| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618930
GI number: 15618930
Start: 1174213
End: 1175673
Strand: Reverse
Name: Not Available
Synonym: CPn1022
Alternate gene names: NA
Gene position: 1175673-1174213 (Counterclockwise)
Preceding gene: 15618932
Following gene: 15618929
Centisome position: 95.57
GC content: 41.75
Gene sequence:
>1461_bases ATGAATATGCCTGTTCCTTCTGCAGTTCCCTCTGCAAATATAACTCTAAAAGAAGACAGCTCAACAGTTTCCACAGCCTC TGGAATATTAAAGACTGCAACAGGTGAAGTCTTAGTCTCTTGTACAGCGCTAGAAGGAAGCTCTTCTACAGATGCTTTAA TTAGCTTAGCTTTAGGACAAATCATTCTTGCGACCCAACAAGAACTGCTCTTACAAAGCACAAATGTTCATCAACTCCTC TTCCTCCCTCCTGAAGTTGTAGAATTAGAAATCCAAGTTGTTGACTTGCTAGTGCAATTGGAACATGCAGAGACAATCAC AAGTGAACCACAAGAAACACAAACGCAAAGTAGGAGTGAGCAGACCCTCCCTCAACAAAGCAGCAGTAAACAATCTGCTC TCTCCCCACGCTCCTTAAAACCTGAAATTTCTGATTCTAAACAACAGCAAGCTCTTCAAACACCAAAAGACTCTGCTGTA AGAAAACACAGCGAAGCACCGTCACCTGAGACACAAGCTCGCGCTTCCTTATCTCAGGCAAGCTCAAGTTCTCAGAGATC CTTACCTCCGCAAGAAAGTGCGCCAGAAAGAACACTATTAGAACAACAAAAAGCAAGCTCCTTCTCTCCTCTATCCCAGT TCTCTGCAGAGAAACAAAAAGAGGCCCTGACGACCTCAAAATCTCATGAACTCTATAAAGAACGCGATCAAGATCGCCAA CAAAGAGAGCAGCACGACAGAAAGCACGATCAGGAAGAAGACGCTGAATCTAAAAAGAAAAAGAAGAAACGTGGTCTCGG TGTAGAGGCAGTCGCTGAGGAACCCGGAGAAAATCTAGATATTGCCGCTTTAATCTTCTCAGATCAAATGCGACCTCCTG CTGAAGAAACTTCTAAAAAAGAAACGACATTCAAAAAGAAGCTACCTTCTCCAATGTCTGTGTTTAGCAGATTCATCCCT AGTAAGAATCCGTTATCTGTAGGCTCTTCAATACACGGGCCTATACAAACTCCAAAAGTAGAAAATGTGTTCTTAAGGTT CATGAAGCTCATGGCAAGAATCTTAGGCCAAGCCGAAGCCGAAGCTAATGAACTCTACATGCGAGTCAAACAACGTACCG ATGATGTAGACACACTCACAGTCCTTATCTCTAAGATCAATAATGAAAAGAAAGACATTGATTGGAGTGAAAATGAAGAG ATGAAAGCTCTTTTAAATCGAGCTAAAGAGATTGGAGTCACTATAGACAAAGAAAAATATACTTGGACAGAAGAGGAAAA AAGACTTCTAAAAGAGAATGTCCAAATGCGCAAAGAGAATATGGAGAAAATCACTCAAATGGAAAGGACGGACATGCAAA GGCACCTCCAAGAGATTTCTCAATGTCATCAAGCGCGCTCTAATGTATTGAAGTTATTGAAAGAACTTATGGACACCTTC ATTTACAACCTACGCCCCTAA
Upstream 100 bases:
>100_bases TTATTTTCTCTTTCCCTCTAAACCGCTTACAATCAAACTTGCAGGAAAATGATGTTTTAGCTAATTTTCCTTTTTTTTCT ACGCACTCAAATTACAAATC
Downstream 100 bases:
>100_bases TGTCACATTTAAATTATTTACTAGAAAAAATCGCTGCATCTTCCAAGGAAGACTTCCCTTTCCCAGATGATTTGGAAAGC TATTTGGAAGGATATGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKDSAV RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF IYNLRP
Sequences:
>Translated_486_residues MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKDSAV RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF IYNLRP >Mature_486_residues MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKDSAV RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF IYNLRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54695; Mature: 54695
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQ CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH IILATQQELLLQSTNVHQLLFLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSE HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKDSAVRKHSEAPSPETQARASLSQA HHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH SSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ CCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKK HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHH ETTFKKKLPSPMSVFSRFIPSKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEA HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEEMKALLNRAKEIGVTIDKEKY HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCC TWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYNLRP HHHCCC >Mature Secondary Structure MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQ CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH IILATQQELLLQSTNVHQLLFLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSE HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKDSAVRKHSEAPSPETQARASLSQA HHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH SSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ CCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKK HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHH ETTFKKKLPSPMSVFSRFIPSKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEA HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEEMKALLNRAKEIGVTIDKEKY HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCC TWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYNLRP HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA