| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618919
GI number: 15618919
Start: 1159899
End: 1160306
Strand: Reverse
Name: Not Available
Synonym: CPn1011
Alternate gene names: NA
Gene position: 1160306-1159899 (Counterclockwise)
Preceding gene: 15618920
Following gene: 15618918
Centisome position: 94.32
GC content: 43.63
Gene sequence:
>408_bases ATGAGGTTAAAAAATTACCCCATGATACAGTTTTCTTTTTTCTTGCCCCAAACATGCATTCTGCTGCTAGCCTCAGACTC TTTAACTAATATCCTAGCGCTACACCATCTCCTCGCGAATTATTCAGTAAAACAGCGAATGCTTGTTCTACTGAGAGAAA GCTTCTTCGCATTCATCGCTATGTTTGCTCTTTACGGACTCGCTCTCGGAGGCCTGAAAGTATTGAATACCCCCGTATGC GCTATAGAAGTTGTCGGAGGAATTGCGGTAACACTAGCAGGAGTCCGAGCTGTTTTGCGATTGGGAAAAGAAGAATCCTG GATCCCTTATAAATTCAATATGTCCCCCTCATATTCTCCGTGCATTTCTCCAATAGCTCTCCCTTTAATGTTTGGACCCT CTGGTTAG
Upstream 100 bases:
>100_bases TTCTAAAAAATATTACCTATAAATAAAATTTATACAAACCTCGATAAACTCTCCCAATTCCGAAGTATCCTCTAGAGGAT TCCCTTGAAAATAATAGGAA
Downstream 100 bases:
>100_bases CAGCTTGCTGTACACTCATAGCGAGAAATCACAATACTCTGATCAATTTCCAAATCCTAATTCTCAGCTGGCTACTCATT ACCCTAGCCACCTTTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRLKNYPMIQFSFFLPQTCILLLASDSLTNILALHHLLANYSVKQRMLVLLRESFFAFIAMFALYGLALGGLKVLNTPVC AIEVVGGIAVTLAGVRAVLRLGKEESWIPYKFNMSPSYSPCISPIALPLMFGPSG
Sequences:
>Translated_135_residues MRLKNYPMIQFSFFLPQTCILLLASDSLTNILALHHLLANYSVKQRMLVLLRESFFAFIAMFALYGLALGGLKVLNTPVC AIEVVGGIAVTLAGVRAVLRLGKEESWIPYKFNMSPSYSPCISPIALPLMFGPSG >Mature_135_residues MRLKNYPMIQFSFFLPQTCILLLASDSLTNILALHHLLANYSVKQRMLVLLRESFFAFIAMFALYGLALGGLKVLNTPVC AIEVVGGIAVTLAGVRAVLRLGKEESWIPYKFNMSPSYSPCISPIALPLMFGPSG
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14840; Mature: 14840
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKNYPMIQFSFFLPQTCILLLASDSLTNILALHHLLANYSVKQRMLVLLRESFFAFIA CCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH MFALYGLALGGLKVLNTPVCAIEVVGGIAVTLAGVRAVLRLGKEESWIPYKFNMSPSYSP HHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC CISPIALPLMFGPSG HHHHHHHHHEECCCC >Mature Secondary Structure MRLKNYPMIQFSFFLPQTCILLLASDSLTNILALHHLLANYSVKQRMLVLLRESFFAFIA CCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH MFALYGLALGGLKVLNTPVCAIEVVGGIAVTLAGVRAVLRLGKEESWIPYKFNMSPSYSP HHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC CISPIALPLMFGPSG HHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA