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The map label for this gene is yigN

Identifier: 15618890

GI number: 15618890

Start: 1129959

End: 1131194

Strand: Reverse

Name: yigN

Synonym: CPn0982

Alternate gene names: 15618890

Gene position: 1131194-1129959 (Counterclockwise)

Preceding gene: 15618891

Following gene: 15618888

Centisome position: 91.95

GC content: 40.13

Gene sequence:

>1236_bases
ATGAACCTCCCTGTTTCCCTAGCGTGCCTACTTTTATCTGGGTGTGTGTTTTTTCTGGGAGTCTTCGTATCGTCTTCTCT
CTATGCAAGGAAGAAGCGTGCGTTTCTAGAGAAGATTCAGAAATTAGAACATGAAAACCAACTGCTACAGACTTCTTTAA
ATCTTAGCCGCCATCAAGAGCAGTTAATTGAAGATTTCAGCAATCGTCTAGCACTTTCTTCTCACAAACTCATCAAAGAT
ATGAAAGAAGAGGCTCAGAATTATTTTGGTGATACGTCTAAATCTTTTCAGTCTATACTTTCTCCTATCCAAACGACACT
CACGACATTTAAGCAAAGTTTAGAGACATTTGAAACTAAGCATGCCGAAGATCGTGGAAGGTTAAAAGAACAGATATCGC
AATTACTTGCTGTAGAGAAAAAATTGGAGCATGAAACTCATGTTCTCACGGACATTTTAAAGCACCCAGGATCTCGAGGA
CGTTGGGGAGAAATCCAACTGGAGAGAATTTTAGAGCTTGCCGGGATGTTAAAATACTGTGACTACGACAGTCAAACCAC
AAGTGCCCAAGGAGCATTTCGGGCGGATATTATTATTCGGCTGCCTCAAGATCGCTGTTTAATTATTGATGCTAAAGCTC
CGATTTCAGACTCCTATTTTTCTGTAGAGGAGATTGACAAGGGGGATCTTGTTGATAAAATTAAAGAGCACATTAAGACT
CTGAAATCCAAGAGTTACTGGGAAAAGTTTCATCAATCACCAGAATACGTGATTCTTTTTCTTCCTGGGGAGAGCTTATT
CAATGATGCAATTCGGTTAGCTCCTGAATTGATGGAGATTGGAGCTTCTTCAAACGTAATCTTATCCAGTCCTTTGACTT
TACTTGCTCTACTTAAGACGATTGCTTACATGTGGAAGCAAGAGAATCTGCAAAAACAAATTCAAGAGGTCAGTCTTTTA
GGTAAAGAGCTCCATCGTCGCCTACAGGTAGTGTTCACACATTTTCAGAAGATAGGCAAAAATTTAAACCAGACGGTACA
AAGTTACAACGATATGACCTCTAGCTTTCAATACCGGGTACTGCCTACATTAAGGAAGTTCGAAGGCTTGGAAACCTCGT
CATCCCATCAGATTGAAGAGCCTACCCCTATAGAAAGCTTAGCCACCTCGTTTCCACACACATGTGATATAGATACGAAC
TTAGCTGTTATTGAGTCTTTAGAAAAACAAGACTAA

Upstream 100 bases:

>100_bases
ATCATTTTGTTGAAGTCTTTTTCCTTGTATCTTGGCTATATACTTTAGTAGGCTTTCCGATCTTTTCAATCATCTATAGA
AAAAAGAGCTAGCATCTGTT

Downstream 100 bases:

>100_bases
GTCTCAAATTGCTGGTACTATGGGGAAATCTTTATCTAGAGTAAGAACATTATTACGAAGCATCTCTTCCCCTGCAAAAG
ATATCAAAGTTGTCTCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MNLPVSLACLLLSGCVFFLGVFVSSSLYARKKRAFLEKIQKLEHENQLLQTSLNLSRHQEQLIEDFSNRLALSSHKLIKD
MKEEAQNYFGDTSKSFQSILSPIQTTLTTFKQSLETFETKHAEDRGRLKEQISQLLAVEKKLEHETHVLTDILKHPGSRG
RWGEIQLERILELAGMLKYCDYDSQTTSAQGAFRADIIIRLPQDRCLIIDAKAPISDSYFSVEEIDKGDLVDKIKEHIKT
LKSKSYWEKFHQSPEYVILFLPGESLFNDAIRLAPELMEIGASSNVILSSPLTLLALLKTIAYMWKQENLQKQIQEVSLL
GKELHRRLQVVFTHFQKIGKNLNQTVQSYNDMTSSFQYRVLPTLRKFEGLETSSSHQIEEPTPIESLATSFPHTCDIDTN
LAVIESLEKQD

Sequences:

>Translated_411_residues
MNLPVSLACLLLSGCVFFLGVFVSSSLYARKKRAFLEKIQKLEHENQLLQTSLNLSRHQEQLIEDFSNRLALSSHKLIKD
MKEEAQNYFGDTSKSFQSILSPIQTTLTTFKQSLETFETKHAEDRGRLKEQISQLLAVEKKLEHETHVLTDILKHPGSRG
RWGEIQLERILELAGMLKYCDYDSQTTSAQGAFRADIIIRLPQDRCLIIDAKAPISDSYFSVEEIDKGDLVDKIKEHIKT
LKSKSYWEKFHQSPEYVILFLPGESLFNDAIRLAPELMEIGASSNVILSSPLTLLALLKTIAYMWKQENLQKQIQEVSLL
GKELHRRLQVVFTHFQKIGKNLNQTVQSYNDMTSSFQYRVLPTLRKFEGLETSSSHQIEEPTPIESLATSFPHTCDIDTN
LAVIESLEKQD
>Mature_411_residues
MNLPVSLACLLLSGCVFFLGVFVSSSLYARKKRAFLEKIQKLEHENQLLQTSLNLSRHQEQLIEDFSNRLALSSHKLIKD
MKEEAQNYFGDTSKSFQSILSPIQTTLTTFKQSLETFETKHAEDRGRLKEQISQLLAVEKKLEHETHVLTDILKHPGSRG
RWGEIQLERILELAGMLKYCDYDSQTTSAQGAFRADIIIRLPQDRCLIIDAKAPISDSYFSVEEIDKGDLVDKIKEHIKT
LKSKSYWEKFHQSPEYVILFLPGESLFNDAIRLAPELMEIGASSNVILSSPLTLLALLKTIAYMWKQENLQKQIQEVSLL
GKELHRRLQVVFTHFQKIGKNLNQTVQSYNDMTSSFQYRVLPTLRKFEGLETSSSHQIEEPTPIESLATSFPHTCDIDTN
LAVIESLEKQD

Specific function: Involved in DNA recombination

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family

Homologues:

Organism=Escherichia coli, GI1790266, Length=383, Percent_Identity=27.6762402088773, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RMUC_CHLPN (Q9Z6S7)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   B72012
- PIR:   C86613
- RefSeq:   NP_225176.1
- RefSeq:   NP_301037.1
- RefSeq:   NP_445412.1
- RefSeq:   NP_877291.1
- GeneID:   1467698
- GeneID:   895604
- GeneID:   919742
- GeneID:   963327
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0874
- KEGG:   cpn:CPn0982
- KEGG:   cpt:CpB1019
- TIGR:   CP_0874
- HOGENOM:   HBG413877
- OMA:   WGEVQLR
- PhylomeDB:   Q9Z6S7
- ProtClustDB:   CLSK871617
- BioCyc:   CPNE115711:CP_0874-MONOMER
- BioCyc:   CPNE115713:CPN0982-MONOMER
- BioCyc:   CPNE138677:CPJ0982-MONOMER
- BioCyc:   CPNE182082:CPB1019-MONOMER
- InterPro:   IPR003798

Pfam domain/function: PF02646 RmuC

EC number: NA

Molecular weight: Translated: 47021; Mature: 47021

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPVSLACLLLSGCVFFLGVFVSSSLYARKKRAFLEKIQKLEHENQLLQTSLNLSRHQE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLIEDFSNRLALSSHKLIKDMKEEAQNYFGDTSKSFQSILSPIQTTLTTFKQSLETFETK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAEDRGRLKEQISQLLAVEKKLEHETHVLTDILKHPGSRGRWGEIQLERILELAGMLKYC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
DYDSQTTSAQGAFRADIIIRLPQDRCLIIDAKAPISDSYFSVEEIDKGDLVDKIKEHIKT
CCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
LKSKSYWEKFHQSPEYVILFLPGESLFNDAIRLAPELMEIGASSNVILSSPLTLLALLKT
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHH
IAYMWKQENLQKQIQEVSLLGKELHRRLQVVFTHFQKIGKNLNQTVQSYNDMTSSFQYRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LPTLRKFEGLETSSSHQIEEPTPIESLATSFPHTCDIDTNLAVIESLEKQD
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNLPVSLACLLLSGCVFFLGVFVSSSLYARKKRAFLEKIQKLEHENQLLQTSLNLSRHQE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLIEDFSNRLALSSHKLIKDMKEEAQNYFGDTSKSFQSILSPIQTTLTTFKQSLETFETK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAEDRGRLKEQISQLLAVEKKLEHETHVLTDILKHPGSRGRWGEIQLERILELAGMLKYC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
DYDSQTTSAQGAFRADIIIRLPQDRCLIIDAKAPISDSYFSVEEIDKGDLVDKIKEHIKT
CCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
LKSKSYWEKFHQSPEYVILFLPGESLFNDAIRLAPELMEIGASSNVILSSPLTLLALLKT
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHH
IAYMWKQENLQKQIQEVSLLGKELHRRLQVVFTHFQKIGKNLNQTVQSYNDMTSSFQYRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LPTLRKFEGLETSSSHQIEEPTPIESLATSFPHTCDIDTNLAVIESLEKQD
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362