| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618778
GI number: 15618778
Start: 986655
End: 987401
Strand: Reverse
Name: Not Available
Synonym: CPn0869
Alternate gene names: NA
Gene position: 987401-986655 (Counterclockwise)
Preceding gene: 15618779
Following gene: 15618777
Centisome position: 80.26
GC content: 39.22
Gene sequence:
>747_bases ATGACTCAGGATCCACATGACCACTTTAAATCACGCACTCCAGAGGACCACATAAAGCATGTTAGAGACAAGCACAGAGT CTGTAAAGGGGAGCCCCATACAACCTTTAAAGGGTTTTTCTATCACTTAGCTAATAATGCTTTATCTACTGGCGTTTTTA TTTTTTTCATTCGGACGTTGTTTTTCTTAATTCCTACGAATCGTGCGCTTCAAGTAAAATCCTTAATATCTTTAGGCGTT GGCTGGACATTTTACCACGGATGCTTAAAAGCAAGAAAAGCTTGGGCCTATATGGAACTCTCGCATCGTTCTATGCTGGA AGAGAAAAACGAGATTGAAGAGAATTTTGAACAAGAAAAAATAGAACTCCGGATTTTGTTTGAGAATCAAGGGTTTAAAG ACCCTCTCCTCCAAGAGATGGTAGAATATGTCTGTTCCGATTCTACCCTACTACTAGATACGATGATTCGAGAAGAGCTT TACATTCGAAAAGAAGATCTTCCTCATCCCCTGATTCAAGGAGGATCTAGAATATTAGGAGGTCTATGTGGGCTTGCCAT TTTCCTCCCACTAGTCCTATGCATCAGCTACACTCTTGCAGGGGTCTTTTCTGCTCTTATGGTTCTGGTTCTTTCCTTCC TAAAAGCTAAAATTCTAAAAAACGATAAAATTTCCGAAATGGTTTGGGTGTTAGGGATCTTCATCACTTCCGCGAGTATT ATCTCATCATTAATGAAATTATTATAA
Upstream 100 bases:
>100_bases GAAGTCCTTCGTCCTTATTTAGGAGGGTTGGAGATTCTTCTTCCCAAAGACCAGTGAGAACACATCAGACTGTAGACAGC ATCAAATTCTAAGGAAAATT
Downstream 100 bases:
>100_bases CAGGTCGCTACGTGTTCTCCCGTTTGTTTTTCACTTCATTTTCTGCAGAAGTAGTGAATACATTTTTTGAATCAGGGATG TCTGAAGATACGAGTCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTQDPHDHFKSRTPEDHIKHVRDKHRVCKGEPHTTFKGFFYHLANNALSTGVFIFFIRTLFFLIPTNRALQVKSLISLGV GWTFYHGCLKARKAWAYMELSHRSMLEEKNEIEENFEQEKIELRILFENQGFKDPLLQEMVEYVCSDSTLLLDTMIREEL YIRKEDLPHPLIQGGSRILGGLCGLAIFLPLVLCISYTLAGVFSALMVLVLSFLKAKILKNDKISEMVWVLGIFITSASI ISSLMKLL
Sequences:
>Translated_248_residues MTQDPHDHFKSRTPEDHIKHVRDKHRVCKGEPHTTFKGFFYHLANNALSTGVFIFFIRTLFFLIPTNRALQVKSLISLGV GWTFYHGCLKARKAWAYMELSHRSMLEEKNEIEENFEQEKIELRILFENQGFKDPLLQEMVEYVCSDSTLLLDTMIREEL YIRKEDLPHPLIQGGSRILGGLCGLAIFLPLVLCISYTLAGVFSALMVLVLSFLKAKILKNDKISEMVWVLGIFITSASI ISSLMKLL >Mature_247_residues TQDPHDHFKSRTPEDHIKHVRDKHRVCKGEPHTTFKGFFYHLANNALSTGVFIFFIRTLFFLIPTNRALQVKSLISLGVG WTFYHGCLKARKAWAYMELSHRSMLEEKNEIEENFEQEKIELRILFENQGFKDPLLQEMVEYVCSDSTLLLDTMIREELY IRKEDLPHPLIQGGSRILGGLCGLAIFLPLVLCISYTLAGVFSALMVLVLSFLKAKILKNDKISEMVWVLGIFITSASII SSLMKLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28496; Mature: 28365
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDPHDHFKSRTPEDHIKHVRDKHRVCKGEPHTTFKGFFYHLANNALSTGVFIFFIRTL CCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFLIPTNRALQVKSLISLGVGWTFYHGCLKARKAWAYMELSHRSMLEEKNEIEENFEQEK HHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELRILFENQGFKDPLLQEMVEYVCSDSTLLLDTMIREELYIRKEDLPHPLIQGGSRILG HEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHH GLCGLAIFLPLVLCISYTLAGVFSALMVLVLSFLKAKILKNDKISEMVWVLGIFITSASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISSLMKLL HHHHHHHC >Mature Secondary Structure TQDPHDHFKSRTPEDHIKHVRDKHRVCKGEPHTTFKGFFYHLANNALSTGVFIFFIRTL CCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFLIPTNRALQVKSLISLGVGWTFYHGCLKARKAWAYMELSHRSMLEEKNEIEENFEQEK HHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELRILFENQGFKDPLLQEMVEYVCSDSTLLLDTMIREELYIRKEDLPHPLIQGGSRILG HEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHH GLCGLAIFLPLVLCISYTLAGVFSALMVLVLSFLKAKILKNDKISEMVWVLGIFITSASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISSLMKLL HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA