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The map label for this gene is fliF

Identifier: 15618769

GI number: 15618769

Start: 977605

End: 978630

Strand: Reverse

Name: fliF

Synonym: CPn0860

Alternate gene names: NA

Gene position: 978630-977605 (Counterclockwise)

Preceding gene: 15618770

Following gene: 15618768

Centisome position: 79.55

GC content: 38.79

Gene sequence:

>1026_bases
GTGTTTTTTCAAAATTTGGCAAAAAAACTTACCGCTTTGGGGATTTCTCCCCTAGGATGCCTATTAATAGGTGGGGTGGT
GAGTTGTGCTATTTTATTTGGAAGATCCTCGAACCCATCCTTAGCCCCTACTCAAGTTAAAACAGAAAAAACTTCTGGCA
ATTGGCTGAAGCTCACACAAATGGGGAACCCCAAGCTCATAGAATCTCTAACAAAAAAAGAGCAGTTAGAAAAAGATCTG
ACCTCCTTCCATCCCATTGCATCTGCAAAAGTTGCCATTGCTCTGTCTACAGAAGATGACGTCATGTCTCCTCTGCATCT
CTCTGTCATTCTTACTTTAAGAAAAGAAGAGTCCCTAACTCCTTCACTACTCTTCTCAATTACAGACTATCTATGCAGCA
GTCTTCCTGGGTTGAAACGAGAACATATATCCCTATCTGACAACTTAGGGAACCTCTATATTCCTGAATCTATAACTGTA
AATTCTCTGTTCATCCATACATTAGAAAATTACCTGGGGAAAATTTTCCCCAAGGAACACTTTGCTCTTGCGTATCACGC
AAAAGCAGAGAAGCCCACATTACAGCTCACTTTAAATGAAAATTATATTGCTCATTTAACCAAAGAAGAATCCGAAAAGA
TTGTAGCCCATACTAAACACTACCTCTATCAAAACTATGACGACTCCTATGATATTGTCATAGAAACCCTCCCTTTCGCT
CGTTTACAGAATAAAAAATCGTTCCCAGCAAAAGTTCTAATCGGGAGTATGATTCTTGTCATAAGCTTGATGATTGTTGC
TTTAGCTAGTTTCTACCTCGCAAGACACGCTTATGAGAGAGTCTCCCCCGAACCTAGGAAAATAAAACGAGGCATAAATA
TCTCAAAGCTGTTAGAGATTATACAAAAGGAATCTCCAGAAAAAATAGCTTTAATTCTTTCGTACCTGGACCCTAAGAAA
GCAGAAGCCTTATTAAACAGATTACCCGAAGATCTCAAACATCAAGTGCTGAAATATAAACTTTAA

Upstream 100 bases:

>100_bases
CTAAGAGGAGATGCAATTGTCAATAATTCCTACTTTTTGATAGAGAAGAATACGATGGCAACAATGCCATAGGTTTCGTT
TATTTTTATGAAGGACTCTT

Downstream 100 bases:

>100_bases
GAATTAGGTATTTCTTGTGACAACACCACAATCTCCTGGTTCGCTTTCTCAATCTCACCTTCCTCATCCACATGATCCTT
GGGATACAGAACCTACAAGT

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MFFQNLAKKLTALGISPLGCLLIGGVVSCAILFGRSSNPSLAPTQVKTEKTSGNWLKLTQMGNPKLIESLTKKEQLEKDL
TSFHPIASAKVAIALSTEDDVMSPLHLSVILTLRKEESLTPSLLFSITDYLCSSLPGLKREHISLSDNLGNLYIPESITV
NSLFIHTLENYLGKIFPKEHFALAYHAKAEKPTLQLTLNENYIAHLTKEESEKIVAHTKHYLYQNYDDSYDIVIETLPFA
RLQNKKSFPAKVLIGSMILVISLMIVALASFYLARHAYERVSPEPRKIKRGINISKLLEIIQKESPEKIALILSYLDPKK
AEALLNRLPEDLKHQVLKYKL

Sequences:

>Translated_341_residues
MFFQNLAKKLTALGISPLGCLLIGGVVSCAILFGRSSNPSLAPTQVKTEKTSGNWLKLTQMGNPKLIESLTKKEQLEKDL
TSFHPIASAKVAIALSTEDDVMSPLHLSVILTLRKEESLTPSLLFSITDYLCSSLPGLKREHISLSDNLGNLYIPESITV
NSLFIHTLENYLGKIFPKEHFALAYHAKAEKPTLQLTLNENYIAHLTKEESEKIVAHTKHYLYQNYDDSYDIVIETLPFA
RLQNKKSFPAKVLIGSMILVISLMIVALASFYLARHAYERVSPEPRKIKRGINISKLLEIIQKESPEKIALILSYLDPKK
AEALLNRLPEDLKHQVLKYKL
>Mature_341_residues
MFFQNLAKKLTALGISPLGCLLIGGVVSCAILFGRSSNPSLAPTQVKTEKTSGNWLKLTQMGNPKLIESLTKKEQLEKDL
TSFHPIASAKVAIALSTEDDVMSPLHLSVILTLRKEESLTPSLLFSITDYLCSSLPGLKREHISLSDNLGNLYIPESITV
NSLFIHTLENYLGKIFPKEHFALAYHAKAEKPTLQLTLNENYIAHLTKEESEKIVAHTKHYLYQNYDDSYDIVIETLPFA
RLQNKKSFPAKVLIGSMILVISLMIVALASFYLARHAYERVSPEPRKIKRGINISKLLEIIQKESPEKIALILSYLDPKK
AEALLNRLPEDLKHQVLKYKL

Specific function: Unknown

COG id: COG1536

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38293; Mature: 38293

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFQNLAKKLTALGISPLGCLLIGGVVSCAILFGRSSNPSLAPTQVKTEKTSGNWLKLTQ
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEE
MGNPKLIESLTKKEQLEKDLTSFHPIASAKVAIALSTEDDVMSPLHLSVILTLRKEESLT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCEEEHEEEECCCCCCC
PSLLFSITDYLCSSLPGLKREHISLSDNLGNLYIPESITVNSLFIHTLENYLGKIFPKEH
HHHHHHHHHHHHHCCCCCCHHCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHH
FALAYHAKAEKPTLQLTLNENYIAHLTKEESEKIVAHTKHYLYQNYDDSYDIVIETLPFA
EEEEEECCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
RLQNKKSFPAKVLIGSMILVISLMIVALASFYLARHAYERVSPEPRKIKRGINISKLLEI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH
IQKESPEKIALILSYLDPKKAEALLNRLPEDLKHQVLKYKL
HHCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MFFQNLAKKLTALGISPLGCLLIGGVVSCAILFGRSSNPSLAPTQVKTEKTSGNWLKLTQ
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEE
MGNPKLIESLTKKEQLEKDLTSFHPIASAKVAIALSTEDDVMSPLHLSVILTLRKEESLT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCEEEHEEEECCCCCCC
PSLLFSITDYLCSSLPGLKREHISLSDNLGNLYIPESITVNSLFIHTLENYLGKIFPKEH
HHHHHHHHHHHHHCCCCCCHHCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHH
FALAYHAKAEKPTLQLTLNENYIAHLTKEESEKIVAHTKHYLYQNYDDSYDIVIETLPFA
EEEEEECCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
RLQNKKSFPAKVLIGSMILVISLMIVALASFYLARHAYERVSPEPRKIKRGINISKLLEI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH
IQKESPEKIALILSYLDPKKAEALLNRLPEDLKHQVLKYKL
HHCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA