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The map label for this gene is amiB

Identifier: 15618689

GI number: 15618689

Start: 878588

End: 879205

Strand: Reverse

Name: amiB

Synonym: CPn0780

Alternate gene names: NA

Gene position: 879205-878588 (Counterclockwise)

Preceding gene: 15618690

Following gene: 15618688

Centisome position: 71.47

GC content: 38.67

Gene sequence:

>618_bases
ATGCACGCTAAGCTAAGCTTTTTTATTCTTCTAAGTCTGTTATTTTCAGGAATAGATTGCAGTCGTTTGCATGCTGCTGG
AAGGTCTCCTTCTCTACAAGGAGTCCTTGCAGAAATCGAAGATATCTCGGCAAAATTAGCCTCTCACGAAGTGGAGATTG
TCATGTTGTCAGAGCGCTTGGATGAACAAGACTCTAAATGCCAAAAATGGACAGCAGCAAAACCAGAAACCCTGGCTCAA
AAAATCCGCGAGCTAGAGTCCGATCAAAAGGCGCTTGCGAAAACATTAGCTGTACTAACAACTTCTGTTAAAGACTTACA
GACGAACTTACAAAGTAAACTACAAGAAATTCAAAAAGATCACCGAGCTTTAGCTCAGGATTTGCGTCTAGTACGACGTT
CTTTACTTGCTTTAGTAGACAGCTCTTCTCCTGGAGCCTATGCTGACTTCTCGGATCCTGTTCCTGAGAATATTTATATA
GTACGTGAAGGTGATAGTCTTAGTAAAATTGCTAAAAAATATAAACTTTCAGTAACTGAATTAAAGAAAATTAATAAATT
AGATTCCGATGCTATCTATGCTGGGCAACGACTTTGTTTACAAAGAAATAAGCAATAA

Upstream 100 bases:

>100_bases
GATCGTCTATCTACTATTTCCTACGGAAAAGAACATCCTTTAAATTCGGGACACAACGAACTAGCATGGCAACAAAATCG
CCGTACAGAGTTTAAGATTC

Downstream 100 bases:

>100_bases
TAACCATCTTAGATTCGCAAATCTTTTCAAAACTAAGTTTCTCTCTGTAGATAATAAACAAACAGTCCTGTACGATCAGA
AATAAAGATTCGATCTCATA

Product: N-acetylmuramoyl-L-Ala amidase

Products: NA

Alternate protein names: Periplasmic Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase; Invasin Repeat-Containing Phosphatase

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MHAKLSFFILLSLLFSGIDCSRLHAAGRSPSLQGVLAEIEDISAKLASHEVEIVMLSERLDEQDSKCQKWTAAKPETLAQ
KIRELESDQKALAKTLAVLTTSVKDLQTNLQSKLQEIQKDHRALAQDLRLVRRSLLALVDSSSPGAYADFSDPVPENIYI
VREGDSLSKIAKKYKLSVTELKKINKLDSDAIYAGQRLCLQRNKQ

Sequences:

>Translated_205_residues
MHAKLSFFILLSLLFSGIDCSRLHAAGRSPSLQGVLAEIEDISAKLASHEVEIVMLSERLDEQDSKCQKWTAAKPETLAQ
KIRELESDQKALAKTLAVLTTSVKDLQTNLQSKLQEIQKDHRALAQDLRLVRRSLLALVDSSSPGAYADFSDPVPENIYI
VREGDSLSKIAKKYKLSVTELKKINKLDSDAIYAGQRLCLQRNKQ
>Mature_205_residues
MHAKLSFFILLSLLFSGIDCSRLHAAGRSPSLQGVLAEIEDISAKLASHEVEIVMLSERLDEQDSKCQKWTAAKPETLAQ
KIRELESDQKALAKTLAVLTTSVKDLQTNLQSKLQEIQKDHRALAQDLRLVRRSLLALVDSSSPGAYADFSDPVPENIYI
VREGDSLSKIAKKYKLSVTELKKINKLDSDAIYAGQRLCLQRNKQ

Specific function: Unknown

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22862; Mature: 22862

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAKLSFFILLSLLFSGIDCSRLHAAGRSPSLQGVLAEIEDISAKLASHEVEIVMLSERL
CCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEHHHHH
DEQDSKCQKWTAAKPETLAQKIRELESDQKALAKTLAVLTTSVKDLQTNLQSKLQEIQKD
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRALAQDLRLVRRSLLALVDSSSPGAYADFSDPVPENIYIVREGDSLSKIAKKYKLSVTE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
LKKINKLDSDAIYAGQRLCLQRNKQ
HHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHAKLSFFILLSLLFSGIDCSRLHAAGRSPSLQGVLAEIEDISAKLASHEVEIVMLSERL
CCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEHHHHH
DEQDSKCQKWTAAKPETLAQKIRELESDQKALAKTLAVLTTSVKDLQTNLQSKLQEIQKD
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRALAQDLRLVRRSLLALVDSSSPGAYADFSDPVPENIYIVREGDSLSKIAKKYKLSVTE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
LKKINKLDSDAIYAGQRLCLQRNKQ
HHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA