Click here to switch to the map view.

The map label for this gene is ygfA

Identifier: 15618672

GI number: 15618672

Start: 859969

End: 860511

Strand: Reverse

Name: ygfA

Synonym: CPn0763

Alternate gene names: 15618672

Gene position: 860511-859969 (Counterclockwise)

Preceding gene: 15618673

Following gene: 15618671

Centisome position: 69.95

GC content: 45.12

Gene sequence:

>543_bases
ATGACTGATCCTAAAATAGAGAAATCCGCACTACGTAAACTATTTATCTCTATACGCAGGGATCTCTCTGAAGAACGCAA
GCATGAGGCCTCTTCTGCAGTGGCCTCTTTCGTTCGCAGCTTTTCTAAAGAGAGCGTCGTTCTCTCTTTTGTCTCTTTCA
ATCACGAAATAGACATGCAAGAAGCAAATCGCATACTTATCCAGAAATGTACCCTAGCTCTTCCCAAGATTGATCAGGAA
AACCTCTATCCTGTTCTTATCCCCTCGATAGACGATCTTATTTCCGTTGTGCATCCCAAAGATCCCTTCTCGAAACAAAC
ACCGATCTCGAGTGATAAGATTACCCACGTGCTCGTTCCGGGCCTTGCCTTTGATCAGCAGGGCTATCGGCTTGGTTATG
GTCACGGTTTCTACGATCGCTGGTTAGCACAACATCCCTATCCCTCTATACGAACCATCGGCATCGGCTACTGCGAACAA
AAAATCGATAGACTTCCCCAAGAAAGTCATGACATCCCCCTTTCCCAAATCTATTTATGTTAG

Upstream 100 bases:

>100_bases
TCGTGGTTGTGGGACTGCAGTATTTTTCTCGTCGGCGGGAACTATTACTAAAAAAATCCCCTATCAGGACGGCAAACCTT
TGCTCAACTAGAACTTCCCT

Downstream 100 bases:

>100_bases
AAATAAGAAGAAGTTCTTTTGATTTTTTGAAAATAGTTTCCCTTGTTAAAGGAATCTCGGCATCCAATAGATCTATTTTT
TCAGTTTCATAATTTAGATA

Product: formyltetrahydrofolate cycloligase

Products: ADP; phosphate; 5,10-methenyltetrahydrofolate

Alternate protein names: 5-Formyltetrahydrofolate Cyclo-Ligase Family Protein; Formyltetrahydrofolate Cycloligase; Formyltetrahydrofolate Synthetase; Ligase

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTDPKIEKSALRKLFISIRRDLSEERKHEASSAVASFVRSFSKESVVLSFVSFNHEIDMQEANRILIQKCTLALPKIDQE
NLYPVLIPSIDDLISVVHPKDPFSKQTPISSDKITHVLVPGLAFDQQGYRLGYGHGFYDRWLAQHPYPSIRTIGIGYCEQ
KIDRLPQESHDIPLSQIYLC

Sequences:

>Translated_180_residues
MTDPKIEKSALRKLFISIRRDLSEERKHEASSAVASFVRSFSKESVVLSFVSFNHEIDMQEANRILIQKCTLALPKIDQE
NLYPVLIPSIDDLISVVHPKDPFSKQTPISSDKITHVLVPGLAFDQQGYRLGYGHGFYDRWLAQHPYPSIRTIGIGYCEQ
KIDRLPQESHDIPLSQIYLC
>Mature_179_residues
TDPKIEKSALRKLFISIRRDLSEERKHEASSAVASFVRSFSKESVVLSFVSFNHEIDMQEANRILIQKCTLALPKIDQEN
LYPVLIPSIDDLISVVHPKDPFSKQTPISSDKITHVLVPGLAFDQQGYRLGYGHGFYDRWLAQHPYPSIRTIGIGYCEQK
IDRLPQESHDIPLSQIYLC

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.3.3.2

Molecular weight: Translated: 20569; Mature: 20438

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPKIEKSALRKLFISIRRDLSEERKHEASSAVASFVRSFSKESVVLSFVSFNHEIDMQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECHH
EANRILIQKCTLALPKIDQENLYPVLIPSIDDLISVVHPKDPFSKQTPISSDKITHVLVP
HHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GLAFDQQGYRLGYGHGFYDRWLAQHPYPSIRTIGIGYCEQKIDRLPQESHDIPLSQIYLC
CEEECCCCCEECCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHEECC
>Mature Secondary Structure 
TDPKIEKSALRKLFISIRRDLSEERKHEASSAVASFVRSFSKESVVLSFVSFNHEIDMQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECHH
EANRILIQKCTLALPKIDQENLYPVLIPSIDDLISVVHPKDPFSKQTPISSDKITHVLVP
HHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GLAFDQQGYRLGYGHGFYDRWLAQHPYPSIRTIGIGYCEQKIDRLPQESHDIPLSQIYLC
CEEECCCCCEECCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 5-formyltetrahydrofolate

Specific reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA