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The map label for this gene is recA

Identifier: 15618671

GI number: 15618671

Start: 858536

End: 859597

Strand: Reverse

Name: recA

Synonym: CPn0762

Alternate gene names: 15618671

Gene position: 859597-858536 (Counterclockwise)

Preceding gene: 15618672

Following gene: 15618663

Centisome position: 69.87

GC content: 41.71

Gene sequence:

>1062_bases
ATGAATTTACCTGATAGAAAAAAGGCTCTAGAAGCTGCTGTTGCTTATATTGAAAAGCAATTCGGCGCTGGGTCCATCAT
GAGTTTAGGAAGACACTCTGCCACACATGAAATCTCCACCATCAAAACAGGAGCTTTATCTTTAGACTTAGCTCTTGGAA
TTCATGGGGTCCCCAAAGGACGGGTGATCGAAATCTTTGGTCCTGAATCCTCAGGGAAAACGACACTAGCTACCCATATT
GTCGCGAATGCTCAAAAAATGGGCGGTGTTGCTGCCTATATAGATGCTGAACATGCTTTAGATCCTAGTTATGCATCTCT
TATTGGCGTCAATATCGATGATCTTATGATTTCTCAACCCGACTGTGGTGAAGATGCATTAAGCATAGCAGAATTGCTCG
CGCGTTCAGGAGCTGTCGATGTTATCGTTATTGACTCTGTAGCCGCTTTAGTTCCTAAAAGCGAACTCGAAGGAGACATC
GGTGATGTACACGTAGGCCTACAAGCTCGTATGATGTCTCAAGCATTACGCAAGCTCACCGCTACCCTATCACGTAGCCA
AACCTGTGCAGTGTTCATTAACCAAATCCGAGAGAAAATCGGTGTTAGCTTCGGAAACCCAGAAACTACTACGGGAGGAC
GTGCCTTAAAATTCTACTCTTCAATACGATTAGATATTCGCCGTATAGGTTCAATAAAAGGCAGTGATAACTCTGACATC
GGAAATCGAATTAAAGTGAAGGTAGCTAAAAATAAACTTGCTCCTCCATTCAGAATCGCAGAATTTGACATCCTATTCAA
TGAAGGGATTTCTTCTGCAGGTTGTATCCTAGATCTTGCTGTCGAATATAATATTATTGAGAAAAAAGGTTCTTGGTTCA
ACTATCAAGAGAAGAAGTTAGGACAGGGAAGAGAATTTGTTCGTGAAGAACTTAAACGTAATAGAAAGCTTTTTGAGGAA
ATTGAGAAGCGCATCTACGATGTAATTGCAGCGAATAAAACTCCCTCTGTTCATGCTAATGAAACACCTCAGGAAGTTCC
TGCTCAAACAGTAGAAGCTTAA

Upstream 100 bases:

>100_bases
ATCTCTCAACTAACTATGAGAAGAACTTCTCTATTTCTCTCGATTCTCAGAGAAACAGAACTATTCTCTGGGGAATATGG
AAACCAAGAGGAGCATTTAC

Downstream 100 bases:

>100_bases
ATTGTAATTTCTAAATAGAAAACATAGAGATTCTACAAATTACCTTGAGACAAAGAATCCCCCCTTCTAATACTTTAGGA
GGGGGGATTCTGTTTACAGA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNLPDRKKALEAAVAYIEKQFGAGSIMSLGRHSATHEISTIKTGALSLDLALGIHGVPKGRVIEIFGPESSGKTTLATHI
VANAQKMGGVAAYIDAEHALDPSYASLIGVNIDDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGDI
GDVHVGLQARMMSQALRKLTATLSRSQTCAVFINQIREKIGVSFGNPETTTGGRALKFYSSIRLDIRRIGSIKGSDNSDI
GNRIKVKVAKNKLAPPFRIAEFDILFNEGISSAGCILDLAVEYNIIEKKGSWFNYQEKKLGQGREFVREELKRNRKLFEE
IEKRIYDVIAANKTPSVHANETPQEVPAQTVEA

Sequences:

>Translated_353_residues
MNLPDRKKALEAAVAYIEKQFGAGSIMSLGRHSATHEISTIKTGALSLDLALGIHGVPKGRVIEIFGPESSGKTTLATHI
VANAQKMGGVAAYIDAEHALDPSYASLIGVNIDDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGDI
GDVHVGLQARMMSQALRKLTATLSRSQTCAVFINQIREKIGVSFGNPETTTGGRALKFYSSIRLDIRRIGSIKGSDNSDI
GNRIKVKVAKNKLAPPFRIAEFDILFNEGISSAGCILDLAVEYNIIEKKGSWFNYQEKKLGQGREFVREELKRNRKLFEE
IEKRIYDVIAANKTPSVHANETPQEVPAQTVEA
>Mature_353_residues
MNLPDRKKALEAAVAYIEKQFGAGSIMSLGRHSATHEISTIKTGALSLDLALGIHGVPKGRVIEIFGPESSGKTTLATHI
VANAQKMGGVAAYIDAEHALDPSYASLIGVNIDDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGDI
GDVHVGLQARMMSQALRKLTATLSRSQTCAVFINQIREKIGVSFGNPETTTGGRALKFYSSIRLDIRRIGSIKGSDNSDI
GNRIKVKVAKNKLAPPFRIAEFDILFNEGISSAGCILDLAVEYNIIEKKGSWFNYQEKKLGQGREFVREELKRNRKLFEE
IEKRIYDVIAANKTPSVHANETPQEVPAQTVEA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=340, Percent_Identity=56.7647058823529, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_CHLPN (Q9Z7E4)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   E72037
- PIR:   H86585
- RefSeq:   NP_224957.1
- RefSeq:   NP_300819.1
- RefSeq:   NP_445647.1
- RefSeq:   NP_877062.1
- ProteinModelPortal:   Q9Z7E4
- SMR:   Q9Z7E4
- PHCI-2DPAGE:   Q9Z7E4
- GeneID:   1467469
- GeneID:   894964
- GeneID:   919533
- GeneID:   963599
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP1110
- KEGG:   cpn:CPn0762
- KEGG:   cpt:CpB0790
- TIGR:   CP_1110
- HOGENOM:   HBG339889
- OMA:   YGEGINT
- ProtClustDB:   PRK09354
- BioCyc:   CPNE115711:CP_1110-MONOMER
- BioCyc:   CPNE115713:CPN0762-MONOMER
- BioCyc:   CPNE138677:CPJ0762-MONOMER
- BioCyc:   CPNE182082:CPB0790-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38228; Mature: 38228

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPDRKKALEAAVAYIEKQFGAGSIMSLGRHSATHEISTIKTGALSLDLALGIHGVPKG
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHEECCCEEEEEEECCCCCCCC
RVIEIFGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGVNIDDLMISQP
CEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECHHHCCCCCHHHEECCCHHHHEECCC
DCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLT
CCCHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHHHH
ATLSRSQTCAVFINQIREKIGVSFGNPETTTGGRALKFYSSIRLDIRRIGSIKGSDNSDI
HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GNRIKVKVAKNKLAPPFRIAEFDILFNEGISSAGCILDLAVEYNIIEKKGSWFNYQEKKL
CCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHH
GQGREFVREELKRNRKLFEEIEKRIYDVIAANKTPSVHANETPQEVPAQTVEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHCCC
>Mature Secondary Structure
MNLPDRKKALEAAVAYIEKQFGAGSIMSLGRHSATHEISTIKTGALSLDLALGIHGVPKG
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHEECCCEEEEEEECCCCCCCC
RVIEIFGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGVNIDDLMISQP
CEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECHHHCCCCCHHHEECCCHHHHEECCC
DCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLT
CCCHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHHHH
ATLSRSQTCAVFINQIREKIGVSFGNPETTTGGRALKFYSSIRLDIRRIGSIKGSDNSDI
HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GNRIKVKVAKNKLAPPFRIAEFDILFNEGISSAGCILDLAVEYNIIEKKGSWFNYQEKKL
CCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHH
GQGREFVREELKRNRKLFEEIEKRIYDVIAANKTPSVHANETPQEVPAQTVEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362