| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618473
GI number: 15618473
Start: 646915
End: 648036
Strand: Reverse
Name: Not Available
Synonym: CPn0562
Alternate gene names: NA
Gene position: 648036-646915 (Counterclockwise)
Preceding gene: 15618474
Following gene: 15618472
Centisome position: 52.68
GC content: 42.96
Gene sequence:
>1122_bases ATGTCAATAGCTATTGCAAGGGAACAATACGCAGCTATATTGGATATGCATCCTAAACCTTCGATCGCCATGTTTTCTTC GGAGCAGGCGAGAACTTCTTGGGAGAAACGACAGGCTCATCCTTACCTTTATCGTCTTCTTGAGATCATATGGGGTGTTG TGAAATTTCTTCTCGGCTTAATCTTCTTTATTCCCTTGGGTCTTTTCTGGGTCCTTCAGAAGATATGTCAGAATTTTATT CTTCTTGGTGCAGGAGGGTGGATTTTTAGACCCATATGCAGGGACTCTAATTTATTGCGACAAGCTTACGCCGCGCGTCT TTTCTCCGCTTCATTCCAAGATCATGTCTCCTCTGTGCGAAGGGTTTGCTTACAGTATGACGAGGTCTTTATTGACGGAT TGGAGTTACGTCTTCCCAATGCTAAGCCAGATCGATGGATGTTAATCTCCAATGGAAACTCCGATTGCTTAGAGTATAGG ACAGTGCTGCAAGGGGAAAAGGACTGGATATTCCGTATTGCTGAAGAGTCTCAATCCAACATTTTAATCTTCAATTACCC AGGAGTCATGAAGAGCCAAGGGAATATAACAAGAAACAATGTAGTCAAATCTTATCAAGCATGCGTACGCTATCTTAGAG ATGAACCCGCAGGACCTCAGGCGCGTCAAATCGTTGCTTATGGCTATTCTTTAGGAGCTAGTGTTCAAGCCGAAGCATTA AGTAAAGAGATCGCAGACGGAAGTGATAGCGTCCGTTGGTTTGTCGTTAAAGATCGAGGAGCTCGCTCTACAGGAGCCGT TGCTAAACAGTTTATTGGAAGTCTAGGAGTTTGGCTGGCGAATCTTACCCATTGGAATATTAATTCTGAAAAGAGAAGCA AGGACTTGCATTGCCCAGAACTCTTTATTTATGGCAAGGATTCCCAAGGTAATCTTATCGGGGATGGATTGTTCAAAAAA GAGACGTGCTTCGCAGCACCATTTTTAGATCCTAAAAACTTGGAAGAGTGTTCAGGGAAGAAAATCCCTGTAGCTCAGAC CGGTCTAAGACACGATCATATCCTTTCCGATGATGTGATTAAAGAAGTTGCAGGTCATATTCAAAGACATTTCGATAATT AG
Upstream 100 bases:
>100_bases ATATTAATATAAATAAACTCGGCTTTTGTTTTTGGTTTATTCAATAATTTCCACTATAATAGTTTGCTCACTACATTCTG CATGAAATTATAAGGTAATA
Downstream 100 bases:
>100_bases AAACTCATCTTTTAAACCAAAAATGAGTTTCCTAAGGTTCATCGCAGATTTAAATCAAAAATCGAGAGCTTTATTTTAAA AGAGTAAAGAAATCTTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSIAIAREQYAAILDMHPKPSIAMFSSEQARTSWEKRQAHPYLYRLLEIIWGVVKFLLGLIFFIPLGLFWVLQKICQNFI LLGAGGWIFRPICRDSNLLRQAYAARLFSASFQDHVSSVRRVCLQYDEVFIDGLELRLPNAKPDRWMLISNGNSDCLEYR TVLQGEKDWIFRIAEESQSNILIFNYPGVMKSQGNITRNNVVKSYQACVRYLRDEPAGPQARQIVAYGYSLGASVQAEAL SKEIADGSDSVRWFVVKDRGARSTGAVAKQFIGSLGVWLANLTHWNINSEKRSKDLHCPELFIYGKDSQGNLIGDGLFKK ETCFAAPFLDPKNLEECSGKKIPVAQTGLRHDHILSDDVIKEVAGHIQRHFDN
Sequences:
>Translated_373_residues MSIAIAREQYAAILDMHPKPSIAMFSSEQARTSWEKRQAHPYLYRLLEIIWGVVKFLLGLIFFIPLGLFWVLQKICQNFI LLGAGGWIFRPICRDSNLLRQAYAARLFSASFQDHVSSVRRVCLQYDEVFIDGLELRLPNAKPDRWMLISNGNSDCLEYR TVLQGEKDWIFRIAEESQSNILIFNYPGVMKSQGNITRNNVVKSYQACVRYLRDEPAGPQARQIVAYGYSLGASVQAEAL SKEIADGSDSVRWFVVKDRGARSTGAVAKQFIGSLGVWLANLTHWNINSEKRSKDLHCPELFIYGKDSQGNLIGDGLFKK ETCFAAPFLDPKNLEECSGKKIPVAQTGLRHDHILSDDVIKEVAGHIQRHFDN >Mature_372_residues SIAIAREQYAAILDMHPKPSIAMFSSEQARTSWEKRQAHPYLYRLLEIIWGVVKFLLGLIFFIPLGLFWVLQKICQNFIL LGAGGWIFRPICRDSNLLRQAYAARLFSASFQDHVSSVRRVCLQYDEVFIDGLELRLPNAKPDRWMLISNGNSDCLEYRT VLQGEKDWIFRIAEESQSNILIFNYPGVMKSQGNITRNNVVKSYQACVRYLRDEPAGPQARQIVAYGYSLGASVQAEALS KEIADGSDSVRWFVVKDRGARSTGAVAKQFIGSLGVWLANLTHWNINSEKRSKDLHCPELFIYGKDSQGNLIGDGLFKKE TCFAAPFLDPKNLEECSGKKIPVAQTGLRHDHILSDDVIKEVAGHIQRHFDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42262; Mature: 42131
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAIAREQYAAILDMHPKPSIAMFSSEQARTSWEKRQAHPYLYRLLEIIWGVVKFLLGL CCEEEHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IFFIPLGLFWVLQKICQNFILLGAGGWIFRPICRDSNLLRQAYAARLFSASFQDHVSSVR HHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RVCLQYDEVFIDGLELRLPNAKPDRWMLISNGNSDCLEYRTVLQGEKDWIFRIAEESQSN HHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHEEEEECCCCCC ILIFNYPGVMKSQGNITRNNVVKSYQACVRYLRDEPAGPQARQIVAYGYSLGASVQAEAL EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECHHCCCCHHHHHH SKEIADGSDSVRWFVVKDRGARSTGAVAKQFIGSLGVWLANLTHWNINSEKRSKDLHCPE HHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHCCCCCCCCE LFIYGKDSQGNLIGDGLFKKETCFAAPFLDPKNLEECSGKKIPVAQTGLRHDHILSDDVI EEEEECCCCCCEEECCCCCCCHHEECCCCCCCCHHHHCCCCCCCHHCCCCCCCCCCHHHH KEVAGHIQRHFDN HHHHHHHHHHCCC >Mature Secondary Structure SIAIAREQYAAILDMHPKPSIAMFSSEQARTSWEKRQAHPYLYRLLEIIWGVVKFLLGL CEEEHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IFFIPLGLFWVLQKICQNFILLGAGGWIFRPICRDSNLLRQAYAARLFSASFQDHVSSVR HHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RVCLQYDEVFIDGLELRLPNAKPDRWMLISNGNSDCLEYRTVLQGEKDWIFRIAEESQSN HHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHEEEEECCCCCC ILIFNYPGVMKSQGNITRNNVVKSYQACVRYLRDEPAGPQARQIVAYGYSLGASVQAEAL EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECHHCCCCHHHHHH SKEIADGSDSVRWFVVKDRGARSTGAVAKQFIGSLGVWLANLTHWNINSEKRSKDLHCPE HHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHCCCCCCCCE LFIYGKDSQGNLIGDGLFKKETCFAAPFLDPKNLEECSGKKIPVAQTGLRHDHILSDDVI EEEEECCCCCCEEECCCCCCCHHEECCCCCCCCHHHHCCCCCCCHHCCCCCCCCCCHHHH KEVAGHIQRHFDN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA