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Identifier: 15618054

GI number: 15618054

Start: 163748

End: 164245

Strand: Reverse

Name: Not Available

Synonym: CPn0130

Alternate gene names: NA

Gene position: 164245-163748 (Counterclockwise)

Preceding gene: 15618057

Following gene: 15618053

Centisome position: 13.35

GC content: 37.75

Gene sequence:

>498_bases
ATGGTCAAGTGTTCTTCAATTATACACGAAAATAAAAAACCCGCTCAACTGCTGCCAGAATCCAAATTCGCTGCTATAAC
GAAACTTTCTCTCGCCATACTTTCCCTATTCTTGGGGATTGCAGCATGCATACTCATAGCCCTCTCCGGACTTCTCCCAA
ATACTCTTTTGATAATAGCATTGTCCCTAATCAGTATAATCGTCCTAAGTACAGGAATCTCCCTGCTCATTGGAACACAG
TGCTCGAAAAGTGTTCAAAAGGACGAACAAAAACCAAAATCTATTTTTCCTAAAGAAACACCTTCTTTAGACCCCTGGCT
CCTAAATCCTCTCAAAAATAAAATACAATCCTCCGAAACACTACTCCTAGATCCAACATCCATAAACCTAAAAAATGAGC
TCTTTTTTCCATCCTTCGAAGAATGGAAAAAAATCTTTCTTAAAGATCCAGATTTCCTAATTAAAAGTGCTCTCGCCAAT
TGGAAAATATTAGAATAA

Upstream 100 bases:

>100_bases
GTCGTTGGTTCGAACCCATCCTCCGGAGTATTTTTTCTCTTCGACTCCTTCTTTCAACGATTTTTCAATTTATTATTTGC
ATTTTCTTTGATAGTCTTCT

Downstream 100 bases:

>100_bases
GATGAACAGTATATCCTTTCTCATATCCATATGGATCCGAGAATCTTTGTCACCTCCGAACCTTTACAAAAAACCTATCA
AAAATTACAAGAAAAACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MVKCSSIIHENKKPAQLLPESKFAAITKLSLAILSLFLGIAACILIALSGLLPNTLLIIALSLISIIVLSTGISLLIGTQ
CSKSVQKDEQKPKSIFPKETPSLDPWLLNPLKNKIQSSETLLLDPTSINLKNELFFPSFEEWKKIFLKDPDFLIKSALAN
WKILE

Sequences:

>Translated_165_residues
MVKCSSIIHENKKPAQLLPESKFAAITKLSLAILSLFLGIAACILIALSGLLPNTLLIIALSLISIIVLSTGISLLIGTQ
CSKSVQKDEQKPKSIFPKETPSLDPWLLNPLKNKIQSSETLLLDPTSINLKNELFFPSFEEWKKIFLKDPDFLIKSALAN
WKILE
>Mature_165_residues
MVKCSSIIHENKKPAQLLPESKFAAITKLSLAILSLFLGIAACILIALSGLLPNTLLIIALSLISIIVLSTGISLLIGTQ
CSKSVQKDEQKPKSIFPKETPSLDPWLLNPLKNKIQSSETLLLDPTSINLKNELFFPSFEEWKKIFLKDPDFLIKSALAN
WKILE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_0129/CT_036/TC_0306 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y129_CHLPN (Q9JRX2)

Other databases:

- EMBL:   AE001363
- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   B72116
- PIR:   B81554
- PIR:   B86507
- PIR:   C72116
- RefSeq:   NP_224337.1
- RefSeq:   NP_224338.1
- RefSeq:   NP_300189.1
- RefSeq:   NP_445184.1
- RefSeq:   NP_876407.1
- GeneID:   1466814
- GeneID:   894639
- GeneID:   895596
- GeneID:   918917
- GeneID:   963254
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0642
- KEGG:   cpj:CPj0130
- KEGG:   cpt:CpB0131
- TIGR:   CP_0642
- ProtClustDB:   CLSK337287
- BioCyc:   CPNE115711:CP_0642-MONOMER
- BioCyc:   CPNE115713:CPN0129-MONOMER
- BioCyc:   CPNE115713:CPN0130-MONOMER
- BioCyc:   CPNE138677:CPJ0130-MONOMER
- BioCyc:   CPNE182082:CPB0131-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18254; Mature: 18254

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xae52248)-; HASH(0xbb329d8)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKCSSIIHENKKPAQLLPESKFAAITKLSLAILSLFLGIAACILIALSGLLPNTLLIIA
CCCCHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
LSLISIIVLSTGISLLIGTQCSKSVQKDEQKPKSIFPKETPSLDPWLLNPLKNKIQSSET
HHHHHHHHHHHCHHHHHCCHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCE
LLLDPTSINLKNELFFPSFEEWKKIFLKDPDFLIKSALANWKILE
EEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCH
>Mature Secondary Structure
MVKCSSIIHENKKPAQLLPESKFAAITKLSLAILSLFLGIAACILIALSGLLPNTLLIIA
CCCCHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
LSLISIIVLSTGISLLIGTQCSKSVQKDEQKPKSIFPKETPSLDPWLLNPLKNKIQSSET
HHHHHHHHHHHCHHHHHCCHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCE
LLLDPTSINLKNELFFPSFEEWKKIFLKDPDFLIKSALANWKILE
EEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362