| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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The map label for this gene is uvrA
Identifier: 15618020
GI number: 15618020
Start: 118834
End: 124314
Strand: Reverse
Name: uvrA
Synonym: CPn0096
Alternate gene names: 15618020
Gene position: 124314-118834 (Counterclockwise)
Preceding gene: 15618022
Following gene: 15618009
Centisome position: 10.1
GC content: 42.26
Gene sequence:
>5481_bases ATGAAATCACTTCCTGTATATGTTTCTGGGATCAAAGTTAGAAATCTAAAAAACGTTTCTATCCATTTTAACTCCGAGGA AATCGTTCTACTCACAGGAGTTTCGGGATCAGGAAAATCCTCGATAGCCTTTGATACCCTATATGCTGCTGGAAGAAAAC GCTATATTTCAACACTTCCGACATTCTTCGCTACTACGATAACGACGCTGCCCAATCCTAAAGTAGAAGAAATTCATGGT CTCTCACCAACAATAGCAATAAAACAGAACCACTTTTCACACTATAGTCATGCGACTGTCGGGAGCACTACTGAACTTTT TTCGCACCTTGCTCTTCTCTTCACGCTAGAAGGACAGGCTCGAGATCCTAAGACTAAAGAAGTCTTAGATCTCTACAGCA AGGAGAAAGTTCTTAGTACCATTATGGAGCTCTCTGAAGGTGTACAGATCTCTATTTTAGCTCCTCTGCTACGTAAAGAT ATTGCTGCAATCCATGAGTATGCACAACAGGGATTTACAAAAGTACGTTGTAACGGCACGATCCACCCCATTTACTCCTT CCTAACTTCAGGGATTCCTGAAGACTGCTCTGTTGATATTGTTATTGATACTCTAATCAAAAGTGAAAATAATATTGCAA GGCTCAAAGTTAGCCTATTCACAGCTTTGGAATTCGGAGAGGGTCATTGCTCAGTTCTTAGTGACGAAGAGCTCATGACA TTCTCCACAAAGCAACAGATCGATGACGTCACCTATACCCCTCTAACTCAACAATTATTTTCTCCTCATGCCCTGGAGAG CCGTTGCTCTCTTTGTCAAGGATCCGGGATCTTTATTTCCATAGATAATCCCCTTCTTATCGATGAAAATCTTTCGATTA AAGAGAATTGCTGTAGCTTTGCTGGAAATTGTTCTTCCTATCTCTATCATACTATATACCAAGCTCTTGCTGATGCCTTA AATTTCAATCTAGAAACTCCATGGAAAGATCTTTCCCCAGAAATCCAAAATATTTTTCTTAGGGGAAAAAATAACTTGGT TCTTCCTGTACGACTCTTCGATCAAACTTTAGGAAAAAAGAATCTCACCTATAAAGTATGGAGAGGTGTACTTAACGATA TAGGAGATAAAGTTCGTTATACCACGAAGCCCTCACGTTATCTCTCCAAAGGCATGTCAGCACATTCCTGTTCCCTATGT AAAGGTACAGGCCTAGGAGACTACGCTTCCGTAGCTACTTGGGAAGGAAAAACATTCACTGAATTCCAACAGATGTCTCT AAATAACTGGCACGTATTTTTTTCTAAGGTAAAATCTCCTTCTCTCTCTATTCAAGAAATCCTGCAGGGACTAAAGCAAA GGCTCTCTTTTCTTATTGACTTAGGGCTAGGCTACCTCACTCCAAATCGCGCATTAGCTACCCTTTCTGGAGGAGAACAA GAACGTACAGCAATAGCAAAACACCTAGGAGGAGAACTTTTTGGAATTACCTATATCCTAGATGAGCCCTCCATAGGCTT GCATCCACAAGACACTGAAAAGCTCATCGGTGTCATTAAAAAGCTACGAGATCAAGGCAATACGGTGATTCTTGTTGAGC ATGAAGAACGGATGATTTCTCTTGCGGATAGGATTATTGACATCGGCCCTGGAGCCGGAATTTTCGGAGGCGAGGTCCTC TTTAATGGAAAGCCTGAGGACTTCCTCATGAACTCCTCATCTCTGACAGCAAAATACTTGCGTCAAGAGCTTACCATTCC CATTCCAGAATCCCGGGAAGCTCCCACATCTTGGCTCTTGCTAACAGAGGCAACGATCCACAACCTTAAAAATCTTTCTA TTCGTCTGCCGTTAGCTCGGCTAATCGGAGTTACAGGAGTCTCTGGATCGGGGAAATCCTCTTTAATTAATAATACGTTA GTGCCTGCTATAGAAAGCTTCTTGAAACAAGAGAACCCTAAAAATCTGCATTTTGAGTGGGGATGCATAGGCCGCTTGAT TCACATTACCCGAGATCTTCCAGGACGCTCACAGCGTTCGATACCTTTGACCTATATTAAAGCCTTTGATGATATCCGGG AACTCTTCGCCTCTCAACCTCGCAGCCTACGTCAAGGACTGACAAAAGCTCATTTTAGCTTCAACCAACCTCAAGGAGCT TGTATTCAGTGTCAGGGGTTAGGAACGATGACCATCTCCGATGATGATACACCCATCCCCTGTTCTGAATGCCAAGGGAA GCGTTATCACTCAGAAGTATTGGAAATCCTCTATGAAGGGAAGAACATCGCTGATATTTTAGATATGACAGCGTACGAAG CAGAAAAATTTTTCATTTCACATCCTAAAATTCATGAAAAAATCCATGCTCTATGTTCCCTACGCCTAGATTACCTGCCC TTAGGAAGACCTCTTTCCACATTATCCGGAGGGGAAATTCAAAGGCTAAAACTCGCTCACGAGCTTCTCTTTGCTTCTCC TAAGCAAACACTCTATGTCCTAGATGAACCTACGACAGGCCTTCATACTCATGATATCCAAGCACTGATCGAGGTCCTTC TATCCCTCACATATCTAGGGCACACAGTCCTTGTTATCGAACATAACATGCACGTTGTCAAAGTTTGTGATTATGTTTTG GAATTAGGTCCTGAAGGAGGAGATCTCGGAGGATACCTCCTGGCATCCTGCACCCCTAAGGATCTTATCCAACTAAATAC TCCAACAGCAAAAGCGTTGGCCCCCTATATTGAAGGTTCTCTAGACATACCGGTAGTAAAATCTGAACCGCCATCCTCTC CTAAATCTTGTGATATCCTTATCAAGGATGCCTATCAAAATAATCTCAAACACATAGATCTTGCTCTTCCGAGAAACTCC CTAATAGCAATTGCGGGTCCTGGAGCCTCAGGGAAACATTCTTTAGTCTTTGATATACTCTATGCATCAGGAAATATCGC TTATGCCGAGCTCTTCCCTCCCTACATTAGACAGGGTCTGCTTAAGGAGACTCCTCTACCCTCTGTAGGAGAGGTAAAAG GACTCTCTCCAGTCATTTCGGTAAGAAAATGTAGCTCCTCCAATCGCTCGTACCATACAATAGCCTCGGCTCTCGGATTA AGCAATGGTCTGGAAAAGCTCTTTGCCATCTTAGGAGAACCTTTTTCTCCCCTTACAGAAGAAAAACTCTCTAAAACTAC ACCTCAGACCATCATCGATAGCCTACTCAAAAGCTATAAAGACGATTACGTCACTATAACCTCTCCGATTCCTCTTGGTT CTGATCTGGAAATCTTCCTTCAAGAAAAACAAAAAGAGGGATTCATAAAGTTATATTCTGAGGGGAACCTCTATGATTTA GATGAGAGGCTGCCTCTAAATCTCATAGAACCTGCTATAGTCATACAACATACAAAAGTATCCCCGAAAAATAGTTCCTC TTTATTATCCGCAATCTCGGTAGCTTTTTCTCTATCCTCAGAAATCTGGATCTATATCTCTCAGAAAAAGCAACGAAAAC TCTCGTATTCCTTAGGGTGGAAAGATAAGAAAGGGAGACTCTATCCCGAGATTACACATCAACTACTTTCTTCTGACCAT CCCGAGGGTCGTTGCCTTACATGTGGAGGTCGTGGCGAAATCCTAAAAATCTCCCTAGAAGAGCATAAAGAAAAAATTGC TCACTACACTCCTTTAGAGTTTTTTAGTTTATTCTTTCCAAAGAGCTATATGAAGCCTGTACAAAAGCTGCTTAAAGATG AGAATGCCTCTCAACCACTAAAGTTGCTAACTACGAAAGAGTTCCTAAATTTTTGCCGAGGTTCCTCAGAGTTTCCAGGA ATGAACGCACTACTTATGGAGCAGCTAGATACTGAATCTGACTCTCCCCTGATAAAACCTCTGCTTGCTCTTACCTCCTG TCCTGCCTGCAAAGGCTCAGGACTAAACGATTATGCCAACTATGTGCGAATCAACAATACCTCGCTTTTGGATATTTATC AGGAAGATGCCACATTCTTAGAATCTTTCCTAAACACTATAGGAACCGATGATACAAGAAGCATAATCCAAGATTTGATG AATCGCCTTACCTTCATTAGTAAAGTAGGCCTGAGCTATATTACCCTTGGGCAAAGGCAAGACACTCTCAGTGATGGTGA GAACTACCGTTTACACCTTGCCAAAAAGATCTCTATAAATCTTACCAACATCGTCTACTTATTCGAAGAGCCTCTTTCTG GACTGCACCCCCAGGATCTTCCTACCATAGTTCAGCTACTTAAAGAGCTCGTAGCAAATAACAACACAGTAATTGCTACC GATCGGTCCTGTTCTTTAATCCCCCATGCCGATCACGCGATCTTCTTGGGTCCAGGATCTGGACCTCAAGGAGGATTTCT CATGGATTCTGATACTGAGGTTTGCCCATCTGTAGACCTACACGCTAACGTTCCCCAAACTGAGGTTTGTCCCAAGGCTC CACTTTCTATAAGTAAGGCAAACCATACCCGAGGATCCGATCGTACATTAAAGGTAAATCTATCGATACACCATATTCAG AATTTGAAAGTATCGGCTCCTCTCCATGCTTTGGTTGCCATTGGAGGAGTTTCAGGATCTGGGAAAACCTCTCTACTTTT AGAAGGATTTAAAAAACAAGCTGAGCTCCTGATAGCAAAAGGAACTACAACATTTTCCGACCTTGTAGTGATCGACTCTC ATCCAATAGCTTCATCGCAACGCTCTGATATCAGCACCTATTTCGATATTGCTCCTTCCTTGAGAGCTTTTTATGCTTCG CTAACACAAGCCAAAGCCCTGAATATTTCATCTACGATGTTCAGTACAAATACAAAACAAGGACAATGCTCGGATTGCCA AGGACTTGGGTACCAATGGATAGATCGGGCTTTTTACGCTTTAGAAAAGCGTCCCTGCCCTACCTGCTCAGGATTTCGTA TCCAACCTCTTGCTCAGGAAGTCCTTTATGAAGGCAAGCATTTCGGAGAACTTTTGCATACTCCGATTGAAACTGTAGCC CTCCGATTTCCCTTTATTAAAAAGATACAAAAACCTCTAAAAGCACTTCTTGACATAGGACTCGGCTATCTTCCTATCGG CCAAAAACTCTCTTCCTTATCTGTAAGTGAAAAAACAGCACTGAAAACTGCTTATTTTCTCTATCAAACTCCAGAGACTC CCACCCTATTTCTCATTGATGAGCTCTTTTCTTCTCTAGATCCAATCAAAAAACAACATCTTCCAGAAAAACTTCGCTCC CTCATAAATAGCGGCCACTCGGTAATCTACATAGATCACGATGTGAAGTTGTTAAAATCTGCGGACTACCTCATAGAGAT AGGCCCGGGATCTGGGAAACAAGGAGGAAAGCTTCTTTTTTCAGGATCTCCCAAAGATATCTATGCAAGTAAGGACTCGT TGCTGAAAAAGTATATCTGCAATGAAGAACTCGATTCTTAA
Upstream 100 bases:
>100_bases GGTTTAATTTGTACTTGAAATCCCAAGATATCAGTGCGGATATGACTCTTTTCTCAAGGTTAGGTAAGAGACCTTTCTAA GTATATTACGAGAATTCTTT
Downstream 100 bases:
>100_bases GAACTTAGAATCTAAGATCCTGAGACCATACACAAATCATTTAAAGCTGAAATTCTTCGGTTAAGAGGTGATACATAGTC TGGCATAAGTCACGCTCGTC
Product: excinuclease ABC subunit A
Products: NA
Alternate protein names: UvrA protein; Excinuclease ABC subunit A
Number of amino acids: Translated: 1826; Mature: 1826
Protein sequence:
>1826_residues MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFATTITTLPNPKVEEIHG LSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKD IAAIHEYAQQGFTKVRCNGTIHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSFAGNCSSYLYHTIYQALADAL NFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLC KGTGLGDYASVATWEGKTFTEFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMISLADRIIDIGPGAGIFGGEVL FNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTL VPAIESFLKQENPKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLP LGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVL ELGPEGGDLGGYLLASCTPKDLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGL SNGLEKLFAILGEPFSPLTEEKLSKTTPQTIIDSLLKSYKDDYVTITSPIPLGSDLEIFLQEKQKEGFIKLYSEGNLYDL DERLPLNLIEPAIVIQHTKVSPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPLKLLTTKEFLNFCRGSSEFPG MNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYANYVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLM NRLTFISKVGLSYITLGQRQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKANHTRGSDRTLKVNLSIHHIQ NLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYAS LTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRS LINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKYICNEELDS
Sequences:
>Translated_1826_residues MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFATTITTLPNPKVEEIHG LSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKD IAAIHEYAQQGFTKVRCNGTIHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSFAGNCSSYLYHTIYQALADAL NFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLC KGTGLGDYASVATWEGKTFTEFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMISLADRIIDIGPGAGIFGGEVL FNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTL VPAIESFLKQENPKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLP LGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVL ELGPEGGDLGGYLLASCTPKDLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGL SNGLEKLFAILGEPFSPLTEEKLSKTTPQTIIDSLLKSYKDDYVTITSPIPLGSDLEIFLQEKQKEGFIKLYSEGNLYDL DERLPLNLIEPAIVIQHTKVSPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPLKLLTTKEFLNFCRGSSEFPG MNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYANYVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLM NRLTFISKVGLSYITLGQRQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKANHTRGSDRTLKVNLSIHHIQ NLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYAS LTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRS LINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKYICNEELDS >Mature_1826_residues MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFATTITTLPNPKVEEIHG LSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKD IAAIHEYAQQGFTKVRCNGTIHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSFAGNCSSYLYHTIYQALADAL NFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLC KGTGLGDYASVATWEGKTFTEFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMISLADRIIDIGPGAGIFGGEVL FNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTL VPAIESFLKQENPKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLP LGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVL ELGPEGGDLGGYLLASCTPKDLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGL SNGLEKLFAILGEPFSPLTEEKLSKTTPQTIIDSLLKSYKDDYVTITSPIPLGSDLEIFLQEKQKEGFIKLYSEGNLYDL DERLPLNLIEPAIVIQHTKVSPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPLKLLTTKEFLNFCRGSSEFPG MNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYANYVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLM NRLTFISKVGLSYITLGQRQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKANHTRGSDRTLKVNLSIHHIQ NLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYAS LTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRS LINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKYICNEELDS
Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ABC transporter domains
Homologues:
Organism=Escherichia coli, GI2367343, Length=949, Percent_Identity=36.2486828240253, Blast_Score=548, Evalue=1e-156,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UVRA_CHLPN (Q9Z985)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: D72120 - PIR: H86502 - RefSeq: NP_224304.1 - RefSeq: NP_300155.1 - RefSeq: NP_445220.1 - RefSeq: NP_876372.1 - ProteinModelPortal: Q9Z985 - SMR: Q9Z985 - GeneID: 1466779 - GeneID: 895700 - GeneID: 918887 - GeneID: 963214 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0678 - KEGG: cpn:CPn0096 - KEGG: cpt:CpB0096 - TIGR: CP_0678 - HOGENOM: HBG414039 - OMA: LHPRDNR - ProtClustDB: PRK00635 - BioCyc: CPNE115711:CP_0678-MONOMER - BioCyc: CPNE115713:CPN0096-MONOMER - BioCyc: CPNE138677:CPJ0096-MONOMER - BioCyc: CPNE182082:CPB0096-MONOMER - GO: GO:0005737 - HAMAP: MF_00205 - InterPro: IPR003439 - InterPro: IPR013815 - InterPro: IPR004602 - Gene3D: G3DSA:3.30.1490.20 - TIGRFAMs: TIGR00630
Pfam domain/function: PF00005 ABC_tran
EC number: NA
Molecular weight: Translated: 201698; Mature: 201698
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLP CCCCCEEEEEEEEECEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TFFATTITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQA HHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEECCCC RDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKDIAAIHEYAQQGFTKVRCNGT CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCC IHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT HHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCEEEEEEEEEEHHHCCCCCEEEECCCHHEE FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSF ECHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHH AGNCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCEEEEHHHHHHHCCCC NLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLCKGTGLGDYASVATWEGKTFT CCHHHHHHHHHHHCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH EFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ HHHHHCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMIS HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHH LADRIIDIGPGAGIFGGEVLFNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLL HHHHHEECCCCCCCCCCEEEECCCCHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEE LTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIESFLKQENPKNLHFEW EEHHHHHHCCCCEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEH GCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFIS EEEECCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEC HPKIHEKIHALCSLRLDYLPLGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTG CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC LHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVLELGPEGGDLGGYLLASCTPK CCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHH DLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS HHEEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEHHHCCCCEEEEEECCCC LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVIS EEEEECCCCCCCCEEEEEEEEECCCEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHH VRKCSSSNRSYHTIASALGLSNGLEKLFAILGEPFSPLTEEKLSKTTPQTIIDSLLKSYK HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCC DDYVTITSPIPLGSDLEIFLQEKQKEGFIKLYSEGNLYDLDERLPLNLIEPAIVIQHTKV CCEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCEEECCCCCCCHHCCCEEEEEECCC SPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCC PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPL CCCCEEEECCCCCEEEEEHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH KLLTTKEFLNFCRGSSEFPGMNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYAN HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHC YVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLMNRLTFISKVGLSYITLGQRQ EEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC DTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT CCCCCCCCEEEEEEEEEEEEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEE DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKA CCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAK CCCCCCCCEEEEEEEEEEECCCEECCCCEEEHEEECCCCCCCHHHHHHHHHHCEEEEEEC GTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYASLTQAKALNISSTMFSTNTKQ CCCCCCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEECCCCC GQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHCCHHHHHHHHCCHHHHH LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLID HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHEEEEEEECCCCCEEEEHH ELFSSLDPIKKQHLPEKLRSLINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLF HHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCEEEEECCCCCCCCCEEEE SGSPKDIYASKDSLLKKYICNEELDS CCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLP CCCCCEEEEEEEEECEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TFFATTITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQA HHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEECCCC RDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKDIAAIHEYAQQGFTKVRCNGT CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCC IHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT HHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCEEEEEEEEEEHHHCCCCCEEEECCCHHEE FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSF ECHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHH AGNCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCEEEEHHHHHHHCCCC NLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLCKGTGLGDYASVATWEGKTFT CCHHHHHHHHHHHCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH EFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ HHHHHCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMIS HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHH LADRIIDIGPGAGIFGGEVLFNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLL HHHHHEECCCCCCCCCCEEEECCCCHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEE LTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIESFLKQENPKNLHFEW EEHHHHHHCCCCEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEH GCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFIS EEEECCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEC HPKIHEKIHALCSLRLDYLPLGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTG CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC LHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVLELGPEGGDLGGYLLASCTPK CCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHH DLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS HHEEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEHHHCCCCEEEEEECCCC LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVIS EEEEECCCCCCCCEEEEEEEEECCCEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHH VRKCSSSNRSYHTIASALGLSNGLEKLFAILGEPFSPLTEEKLSKTTPQTIIDSLLKSYK HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCC DDYVTITSPIPLGSDLEIFLQEKQKEGFIKLYSEGNLYDLDERLPLNLIEPAIVIQHTKV CCEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCEEECCCCCCCHHCCCEEEEEECCC SPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCC PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDENASQPL CCCCEEEECCCCCEEEEEHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH KLLTTKEFLNFCRGSSEFPGMNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYAN HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHC YVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLMNRLTFISKVGLSYITLGQRQ EEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC DTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT CCCCCCCCEEEEEEEEEEEEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEE DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKA CCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAK CCCCCCCCEEEEEEEEEEECCCEECCCCEEEHEEECCCCCCCHHHHHHHHHHCEEEEEEC GTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYASLTQAKALNISSTMFSTNTKQ CCCCCCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEECCCCC GQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHCCHHHHHHHHCCHHHHH LRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLID HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHEEEEEEECCCCCEEEEHH ELFSSLDPIKKQHLPEKLRSLINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLF HHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCEEEEECCCCCCCCCEEEE SGSPKDIYASKDSLLKKYICNEELDS CCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362