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The map label for this gene is rpmC

Identifier: 15607133

GI number: 15607133

Start: 8457

End: 8678

Strand: Direct

Name: rpmC

Synonym: aq_018a

Alternate gene names: 15607133

Gene position: 8457-8678 (Clockwise)

Preceding gene: 15605623

Following gene: 15605624

Centisome position: 0.55

GC content: 37.39

Gene sequence:

>222_bases
ATGTGGGAAAGAGAGAGAAAGAAGTTCTTAGAAGATATTAGAAAAAAGAGCTTACAGGAACTTGAAAAGCTATTGGACGA
ACTTAAACTTGAATTGACAAGACTCAGGTTTAAAAAACAAGTTCAGGGTCTTGAGAACCCCATGGAAATGAGGAAGGTAA
AGAGGAACATAGCTAGAGTTTTGACGGTTATAAGGGAAAAACAGTTGAGAGGTGAAGGGTAA

Upstream 100 bases:

>100_bases
TTGCTCAGGAAGCCTTCACGATAGCGGCCTCAAAGCTCCCCATACCAGTCAGACTCGTTAAGTACGGCGAGTTCACCTTC
AAGTACTGAGGTGGTGAAAG

Downstream 100 bases:

>100_bases
TGACTGAGCAAAAACAGCAGAAGAAGTGGCACGAGAAGAGAAAACACCTCGTTGGAGTTGTAGTTAGCGATAAGATGGAT
AAAACGGTCGTTGTTAAAGT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MWERERKKFLEDIRKKSLQELEKLLDELKLELTRLRFKKQVQGLENPMEMRKVKRNIARVLTVIREKQLRGEG

Sequences:

>Translated_73_residues
MWERERKKFLEDIRKKSLQELEKLLDELKLELTRLRFKKQVQGLENPMEMRKVKRNIARVLTVIREKQLRGEG
>Mature_73_residues
MWERERKKFLEDIRKKSLQELEKLLDELKLELTRLRFKKQVQGLENPMEMRKVKRNIARVLTVIREKQLRGEG

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_AQUAE (P56613)

Other databases:

- EMBL:   AE000657
- ProteinModelPortal:   P56613
- SMR:   P56613
- GenomeReviews:   AE000657_GR
- NMPDR:   fig|224324.1.peg.12
- OMA:   KEPSKIR
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8978; Mature: 8978

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWERERKKFLEDIRKKSLQELEKLLDELKLELTRLRFKKQVQGLENPMEMRKVKRNIARV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LTVIREKQLRGEG
HHHHHHHHHCCCC
>Mature Secondary Structure
MWERERKKFLEDIRKKSLQELEKLLDELKLELTRLRFKKQVQGLENPMEMRKVKRNIARV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LTVIREKQLRGEG
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320