| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is dnaJ1
Identifier: 15606809
GI number: 15606809
Start: 1222227
End: 1223321
Strand: Direct
Name: dnaJ1
Synonym: aq_1735
Alternate gene names: 15606809
Gene position: 1222227-1223321 (Clockwise)
Preceding gene: 15606808
Following gene: 15606811
Centisome position: 78.79
GC content: 45.57
Gene sequence:
>1095_bases ATGTCACAGGCGGTCAAAGACTACTACGAGATACTCGGCGTAAACAGGGACGCTACGAAGGAAGAAATAAAAAAAGCATA CAGAAAACTTGTTAGGATATACCACCCCGACATAAACCCTGACCCGAGCGCTCAGGAGAAATTTAAAGAGATTAACGAAG CTTACCACGTCCTTATAGACGACGAGAGAAGGAGCGAGTACGACGCAATCCTGAGCAGGAATGACGTAGGTAAGTTCAGG GACTTTCTGGAGTACATTCAGGAGTTTGTGGAAAGCATAATTCAGGGAGAAAAGGGAAAGAAGAGAAGACCAAGAAAGGG ACAGGACATAAAGATGAAGCTTCCCCTCACGCTTGAAGAGGCGGGACTCGGGTGCGAAAAGGAAATCATTTACAGCAGAT GGATGGACTGTCCCGTGTGTGAAGGTATGGGAGTAAAGGGAGAGGCGGAAACGGTTGTTTGCCACGCATGCAACGGAGAG GGTAGGAGGGTAAGTGGGATATTTAACTTCCCAAGACCCTGCTCAGTTTGCAAAGGTAAAGGCTTCATCGTTAAAAACCC ATGTCCTACCTGCTATGGAAGAGGTAGAGTTTCCGCACAGCACAAGATAAAAGTTCACATACCTCCCGGAACGGAAGAAG GAGAAGTCTTAAAGGTTCCAGAAAAGGGACATCTCGGTTACTTTGGTGGAAAGCCGGGAGACCTTTACCTTAAGGTAGTT CTAAAAGAACATCCGATTTTTAAGAAGGTAGGCAAGGATCTCCACATGGAAAAAGTAGTGAGCTTTCCGCTCGCGGTTCT GGGAGGAACCGTAAAAGTTCCTACATTGGAGGGCGAAGAAATAGACGTATTCATACAGCCGGGAACTGAGTGCGGTGCAA CGAAAGTGGTAAAGGAAAAAGGGTATCCATACGAAAATGGAAGGGGAGACCTTATAATTCACATAAGGATAGGAGTTCCC AAAAACCTTTCAAAGTCTGAAAGGAAACTTTTAGAAAAGCTCGCAGAATCTATTAAGGAAGAGGGGGAAGAGGTTTACAG GGAAGGTGGAAGTCTTGTAGAAAAGTTAAGTTCCCTCTTTAAAAAGAACGCCTGA
Upstream 100 bases:
>100_bases ACGTGGAGTACGCCAAGTAATTTCCTTCCCTGTCGTTTTATACTCTTATAAGTAAGTTTTATTGAAAGATAAATTCCCGT GATAGAAATTAAGATCTCTG
Downstream 100 bases:
>100_bases AAACTCCCTCTTTATAACAGGGTAGTCGTCCTTTACACCTTTTGAGAGGAGTATCTGAAATACGTAGTTAGAACCTATCA GGAATGAAACAGCGGAAGCG
Product: chaperone DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSQAVKDYYEILGVNRDATKEEIKKAYRKLVRIYHPDINPDPSAQEKFKEINEAYHVLIDDERRSEYDAILSRNDVGKFR DFLEYIQEFVESIIQGEKGKKRRPRKGQDIKMKLPLTLEEAGLGCEKEIIYSRWMDCPVCEGMGVKGEAETVVCHACNGE GRRVSGIFNFPRPCSVCKGKGFIVKNPCPTCYGRGRVSAQHKIKVHIPPGTEEGEVLKVPEKGHLGYFGGKPGDLYLKVV LKEHPIFKKVGKDLHMEKVVSFPLAVLGGTVKVPTLEGEEIDVFIQPGTECGATKVVKEKGYPYENGRGDLIIHIRIGVP KNLSKSERKLLEKLAESIKEEGEEVYREGGSLVEKLSSLFKKNA
Sequences:
>Translated_364_residues MSQAVKDYYEILGVNRDATKEEIKKAYRKLVRIYHPDINPDPSAQEKFKEINEAYHVLIDDERRSEYDAILSRNDVGKFR DFLEYIQEFVESIIQGEKGKKRRPRKGQDIKMKLPLTLEEAGLGCEKEIIYSRWMDCPVCEGMGVKGEAETVVCHACNGE GRRVSGIFNFPRPCSVCKGKGFIVKNPCPTCYGRGRVSAQHKIKVHIPPGTEEGEVLKVPEKGHLGYFGGKPGDLYLKVV LKEHPIFKKVGKDLHMEKVVSFPLAVLGGTVKVPTLEGEEIDVFIQPGTECGATKVVKEKGYPYENGRGDLIIHIRIGVP KNLSKSERKLLEKLAESIKEEGEEVYREGGSLVEKLSSLFKKNA >Mature_363_residues SQAVKDYYEILGVNRDATKEEIKKAYRKLVRIYHPDINPDPSAQEKFKEINEAYHVLIDDERRSEYDAILSRNDVGKFRD FLEYIQEFVESIIQGEKGKKRRPRKGQDIKMKLPLTLEEAGLGCEKEIIYSRWMDCPVCEGMGVKGEAETVVCHACNGEG RRVSGIFNFPRPCSVCKGKGFIVKNPCPTCYGRGRVSAQHKIKVHIPPGTEEGEVLKVPEKGHLGYFGGKPGDLYLKVVL KEHPIFKKVGKDLHMEKVVSFPLAVLGGTVKVPTLEGEEIDVFIQPGTECGATKVVKEKGYPYENGRGDLIIHIRIGVPK NLSKSERKLLEKLAESIKEEGEEVYREGGSLVEKLSSLFKKNA
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain
Homologues:
Organism=Homo sapiens, GI205360838, Length=378, Percent_Identity=32.5396825396825, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI205360840, Length=355, Percent_Identity=33.5211267605634, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI4504511, Length=356, Percent_Identity=33.1460674157303, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI5031741, Length=345, Percent_Identity=31.5942028985507, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI194328760, Length=351, Percent_Identity=30.4843304843305, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI194328758, Length=351, Percent_Identity=30.4843304843305, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI7706495, Length=347, Percent_Identity=29.3948126801153, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI201862587, Length=63, Percent_Identity=60.3174603174603, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI194328762, Length=316, Percent_Identity=26.2658227848101, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI201862518, Length=63, Percent_Identity=60.3174603174603, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI9558755, Length=67, Percent_Identity=53.7313432835821, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI56549115, Length=63, Percent_Identity=60.3174603174603, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI194306642, Length=63, Percent_Identity=57.1428571428571, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI194306640, Length=63, Percent_Identity=57.1428571428571, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI56687498, Length=62, Percent_Identity=53.2258064516129, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI5453690, Length=63, Percent_Identity=57.1428571428571, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI29126218, Length=61, Percent_Identity=60.655737704918, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI72534740, Length=63, Percent_Identity=53.968253968254, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI23503241, Length=66, Percent_Identity=54.5454545454545, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI6631085, Length=65, Percent_Identity=55.3846153846154, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI17388799, Length=64, Percent_Identity=56.25, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI4885495, Length=64, Percent_Identity=56.25, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI45504382, Length=69, Percent_Identity=49.2753623188406, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI21361912, Length=65, Percent_Identity=49.2307692307692, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI22749377, Length=63, Percent_Identity=53.968253968254, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI21553335, Length=64, Percent_Identity=54.6875, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI27151736, Length=66, Percent_Identity=51.5151515151515, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI88501736, Length=66, Percent_Identity=51.5151515151515, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI47777312, Length=64, Percent_Identity=53.125, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI68077168, Length=63, Percent_Identity=55.5555555555556, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI68077166, Length=63, Percent_Identity=55.5555555555556, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1786197, Length=349, Percent_Identity=36.3896848137536, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI1787235, Length=345, Percent_Identity=30.1449275362319, Blast_Score=134, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17553096, Length=363, Percent_Identity=30.5785123966942, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17553098, Length=363, Percent_Identity=30.5785123966942, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17507263, Length=362, Percent_Identity=30.1104972375691, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI212645553, Length=335, Percent_Identity=28.955223880597, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17563890, Length=230, Percent_Identity=29.1304347826087, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17534355, Length=65, Percent_Identity=55.3846153846154, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17554644, Length=63, Percent_Identity=53.968253968254, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115532476, Length=83, Percent_Identity=43.3734939759036, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115532378, Length=65, Percent_Identity=50.7692307692308, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=343, Percent_Identity=34.402332361516, Blast_Score=145, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6323870, Length=366, Percent_Identity=28.6885245901639, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321094, Length=257, Percent_Identity=27.6264591439689, Blast_Score=105, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6323119, Length=378, Percent_Identity=27.7777777777778, Blast_Score=99, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6323813, Length=70, Percent_Identity=54.2857142857143, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6322194, Length=63, Percent_Identity=55.5555555555556, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320888, Length=83, Percent_Identity=46.9879518072289, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6324252, Length=261, Percent_Identity=25.6704980842912, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322388, Length=76, Percent_Identity=47.3684210526316, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574949, Length=347, Percent_Identity=29.6829971181556, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI45549272, Length=370, Percent_Identity=30.5405405405405, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI45552813, Length=370, Percent_Identity=30.5405405405405, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI45552811, Length=370, Percent_Identity=30.5405405405405, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI20129487, Length=349, Percent_Identity=33.5243553008596, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI24584014, Length=349, Percent_Identity=33.5243553008596, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI24646562, Length=340, Percent_Identity=33.8235294117647, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI24646560, Length=340, Percent_Identity=33.8235294117647, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI24646558, Length=340, Percent_Identity=33.8235294117647, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI24646556, Length=340, Percent_Identity=33.8235294117647, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI21357547, Length=340, Percent_Identity=33.8235294117647, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI19920464, Length=346, Percent_Identity=26.5895953757225, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24658562, Length=63, Percent_Identity=58.7301587301587, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24658555, Length=63, Percent_Identity=58.7301587301587, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24641698, Length=70, Percent_Identity=51.4285714285714, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641696, Length=70, Percent_Identity=51.4285714285714, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI85726398, Length=63, Percent_Identity=58.7301587301587, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI18858081, Length=76, Percent_Identity=51.3157894736842, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24668492, Length=63, Percent_Identity=50.7936507936508, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357687, Length=108, Percent_Identity=38.8888888888889, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI161077138, Length=65, Percent_Identity=55.3846153846154, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24654066, Length=64, Percent_Identity=54.6875, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24654070, Length=64, Percent_Identity=54.6875, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24654068, Length=64, Percent_Identity=54.6875, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24654072, Length=64, Percent_Identity=54.6875, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24584630, Length=70, Percent_Identity=50, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI17648033, Length=70, Percent_Identity=50, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI21358273, Length=63, Percent_Identity=55.5555555555556, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17737735, Length=69, Percent_Identity=49.2753623188406, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI28574723, Length=69, Percent_Identity=49.2753623188406, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24668523, Length=69, Percent_Identity=49.2753623188406, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI18859921, Length=71, Percent_Identity=43.6619718309859, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DNAJ1_AQUAE (O67623)
Other databases:
- EMBL: AE000657 - PIR: E70449 - RefSeq: NP_214189.1 - ProteinModelPortal: O67623 - GeneID: 1193338 - GenomeReviews: AE000657_GR - KEGG: aae:aq_1735 - NMPDR: fig|224324.1.peg.1204 - HOGENOM: HBG635315 - OMA: RENEEIF - PhylomeDB: O67623 - ProtClustDB: CLSK2299813 - BioCyc: AAEO224324:AQ_1735-MONOMER - GO: GO:0005737 - HAMAP: MF_01152 - InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 - Gene3D: G3DSA:1.10.287.110 - Gene3D: G3DSA:2.10.230.10 - PANTHER: PTHR11821 - PRINTS: PR00625 - SMART: SM00271
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG; SSF46565 DnaJ_N; SSF49493 HSP40_DnaJ_pep; SSF57938 HSP_DnaJ_cys-rich
EC number: NA
Molecular weight: Translated: 40938; Mature: 40807
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00636 DNAJ_1; PS50076 DNAJ_2; PS51188 ZF_CR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAVKDYYEILGVNRDATKEEIKKAYRKLVRIYHPDINPDPSAQEKFKEINEAYHVLID CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEC DERRSEYDAILSRNDVGKFRDFLEYIQEFVESIIQGEKGKKRRPRKGQDIKMKLPLTLEE CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEHHH AGLGCEKEIIYSRWMDCPVCEGMGVKGEAETVVCHACNGEGRRVSGIFNFPRPCSVCKGK CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHCCC GFIVKNPCPTCYGRGRVSAQHKIKVHIPPGTEEGEVLKVPEKGHLGYFGGKPGDLYLKVV CEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEE LKEHPIFKKVGKDLHMEKVVSFPLAVLGGTVKVPTLEGEEIDVFIQPGTECGATKVVKEK ECCCCCHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHC GYPYENGRGDLIIHIRIGVPKNLSKSERKLLEKLAESIKEEGEEVYREGGSLVEKLSSLF CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KKNA HCCC >Mature Secondary Structure SQAVKDYYEILGVNRDATKEEIKKAYRKLVRIYHPDINPDPSAQEKFKEINEAYHVLID CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEC DERRSEYDAILSRNDVGKFRDFLEYIQEFVESIIQGEKGKKRRPRKGQDIKMKLPLTLEE CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEHHH AGLGCEKEIIYSRWMDCPVCEGMGVKGEAETVVCHACNGEGRRVSGIFNFPRPCSVCKGK CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHCCC GFIVKNPCPTCYGRGRVSAQHKIKVHIPPGTEEGEVLKVPEKGHLGYFGGKPGDLYLKVV CEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEE LKEHPIFKKVGKDLHMEKVVSFPLAVLGGTVKVPTLEGEEIDVFIQPGTECGATKVVKEK ECCCCCHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHC GYPYENGRGDLIIHIRIGVPKNLSKSERKLLEKLAESIKEEGEEVYREGGSLVEKLSSLF CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KKNA HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320