| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is flgL [H]
Identifier: 15606765
GI number: 15606765
Start: 1164831
End: 1166099
Strand: Direct
Name: flgL [H]
Synonym: aq_1663
Alternate gene names: 15606765
Gene position: 1164831-1166099 (Clockwise)
Preceding gene: 15606764
Following gene: 15606770
Centisome position: 75.09
GC content: 37.04
Gene sequence:
>1269_bases ATGAGAGTTCCTGACCTGATTTTTTACCTCTTTTTCGAAAAGGAAAATAACAAAATTAGGAAAAATGTTGAAGATAAGTA CCTAGAAATAGTGAGCGGTAAAAAAATTCAAAACCCTTCCGATGATCCCGCATCCACAAATCAAATACTGAACTTAAAAA CAGAACTCAGTAAACTATCTCAGTTTTCAAGGAACAGGTTGTTTGCGGATACTGTCCTCTCGTATGCGGACACACTTCTT GCGGGAATAGAAGACCGCTTAAAGAGTCTTTACTCAAAAGTTATTCAGTTGTCAAATCAAGTTCACACTCCAGACCAGTT AAAAGCCGCAGCGAAGGAGTTTGAAGAAGCCCTGAAGCTTCTCCTGAACACCGCAAACGAGAAGGTAGGGAATAACTACA TATTTTCTGGAAATGCACTGACCACAAAACCCTTTGACGAAAACACTTTAACTTACAACGGCGGGAACGCAGAATTTGAG ATTTTGATAGATGAGGGTTATAAATCTCCCGTTATCTTGAATGGAGGAAATATTTTTGACGGTATAGGAGGAATAGGTGA AACTTACACCGTGTATGAAATTGAAATAACAGGGTTTGATGATACTCCTGATAACGACGATACAGGTTTTAGAGTAGACA GTATAGAAATACGAGGTGATAATTTAGATGAAATTATTCAGAAGTTAAAAGAAAATTTCGGAGATTCCATGAACATATAC CTTTACGAGAAGAGTGATGGAACACCCATCATACGCCTTGAAGCAAATAGGGATTTTACTGTGACGAATATCAACAATAC AAACCCACGAGAGATAGACACAAATAGTCTCCTTATAAATAGATGGAATGCGACCAGAAATATTTTTGAAACTATAAAAT TTATTGCCGATGAACTGAGCGAAGGTAGATTGTTATTCAGTGGTCCTCTTATTTCTGAGGACTCAAACGATTACTTTAGT AATAATAGACCTGATTACCAAGTAATCAGTAAACCCTTTAATAAGTCAACGGAAGTAAAGTTAATGGAACAAAGTGTAGA AAGAATTATAAACTTCAGAGCAAAGATTGGAAGCATTCTCAAGGAACTAAGAAATGAACAAAACTATCAGGAAGATAGAA AACTCGTCCTTGAAAAGCAAAAATCCGAGGCTGAAGACGCGGACCTTGCAAAGTCTATTTCCGAGTACGAACGCTACAGA CTCGCTTACGATGCAATTATGAAACTCTTTGTAAACCACAAGAACATGAGCATACTCGATTACATTTAA
Upstream 100 bases:
>100_bases GATAATGCAGATTCAGAAAAATTACGAGGCAGTAGCGAAAATTCTTCCGAGAATAGATGAGATGTTCAGGACGCTTTTGA ACATGGTGTGAGGTAGTGAG
Downstream 100 bases:
>100_bases ACCATTATCCTTTCCACAAAGGTTATGTCGTGCTTTCCTTCTATAAACTCTTTCTGATCAAGTACCCTAAGGTGAAATTC CGTGTTGACCTTTAATCCCT
Product: flagellar hook associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MRVPDLIFYLFFEKENNKIRKNVEDKYLEIVSGKKIQNPSDDPASTNQILNLKTELSKLSQFSRNRLFADTVLSYADTLL AGIEDRLKSLYSKVIQLSNQVHTPDQLKAAAKEFEEALKLLLNTANEKVGNNYIFSGNALTTKPFDENTLTYNGGNAEFE ILIDEGYKSPVILNGGNIFDGIGGIGETYTVYEIEITGFDDTPDNDDTGFRVDSIEIRGDNLDEIIQKLKENFGDSMNIY LYEKSDGTPIIRLEANRDFTVTNINNTNPREIDTNSLLINRWNATRNIFETIKFIADELSEGRLLFSGPLISEDSNDYFS NNRPDYQVISKPFNKSTEVKLMEQSVERIINFRAKIGSILKELRNEQNYQEDRKLVLEKQKSEAEDADLAKSISEYERYR LAYDAIMKLFVNHKNMSILDYI
Sequences:
>Translated_422_residues MRVPDLIFYLFFEKENNKIRKNVEDKYLEIVSGKKIQNPSDDPASTNQILNLKTELSKLSQFSRNRLFADTVLSYADTLL AGIEDRLKSLYSKVIQLSNQVHTPDQLKAAAKEFEEALKLLLNTANEKVGNNYIFSGNALTTKPFDENTLTYNGGNAEFE ILIDEGYKSPVILNGGNIFDGIGGIGETYTVYEIEITGFDDTPDNDDTGFRVDSIEIRGDNLDEIIQKLKENFGDSMNIY LYEKSDGTPIIRLEANRDFTVTNINNTNPREIDTNSLLINRWNATRNIFETIKFIADELSEGRLLFSGPLISEDSNDYFS NNRPDYQVISKPFNKSTEVKLMEQSVERIINFRAKIGSILKELRNEQNYQEDRKLVLEKQKSEAEDADLAKSISEYERYR LAYDAIMKLFVNHKNMSILDYI >Mature_422_residues MRVPDLIFYLFFEKENNKIRKNVEDKYLEIVSGKKIQNPSDDPASTNQILNLKTELSKLSQFSRNRLFADTVLSYADTLL AGIEDRLKSLYSKVIQLSNQVHTPDQLKAAAKEFEEALKLLLNTANEKVGNNYIFSGNALTTKPFDENTLTYNGGNAEFE ILIDEGYKSPVILNGGNIFDGIGGIGETYTVYEIEITGFDDTPDNDDTGFRVDSIEIRGDNLDEIIQKLKENFGDSMNIY LYEKSDGTPIIRLEANRDFTVTNINNTNPREIDTNSLLINRWNATRNIFETIKFIADELSEGRLLFSGPLISEDSNDYFS NNRPDYQVISKPFNKSTEVKLMEQSVERIINFRAKIGSILKELRNEQNYQEDRKLVLEKQKSEAEDADLAKSISEYERYR LAYDAIMKLFVNHKNMSILDYI
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=159, Percent_Identity=31.4465408805031, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 48339; Mature: 48339
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVPDLIFYLFFEKENNKIRKNVEDKYLEIVSGKKIQNPSDDPASTNQILNLKTELSKLS CCCCCEEEEEEEECCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHEEHHHHHHHHH QFSRNRLFADTVLSYADTLLAGIEDRLKSLYSKVIQLSNQVHTPDQLKAAAKEFEEALKL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LLNTANEKVGNNYIFSGNALTTKPFDENTLTYNGGNAEFEILIDEGYKSPVILNGGNIFD HHHHHHHHCCCCEEEECCEEEECCCCCCCEEECCCCEEEEEEEECCCCCCEEEECCCEEC GIGGIGETYTVYEIEITGFDDTPDNDDTGFRVDSIEIRGDNLDEIIQKLKENFGDSMNIY CCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEE LYEKSDGTPIIRLEANRDFTVTNINNTNPREIDTNSLLINRWNATRNIFETIKFIADELS EEECCCCCEEEEEECCCCEEEEECCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHC EGRLLFSGPLISEDSNDYFSNNRPDYQVISKPFNKSTEVKLMEQSVERIINFRAKIGSIL CCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KELRNEQNYQEDRKLVLEKQKSEAEDADLAKSISEYERYRLAYDAIMKLFVNHKNMSILD HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YI CC >Mature Secondary Structure MRVPDLIFYLFFEKENNKIRKNVEDKYLEIVSGKKIQNPSDDPASTNQILNLKTELSKLS CCCCCEEEEEEEECCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHEEHHHHHHHHH QFSRNRLFADTVLSYADTLLAGIEDRLKSLYSKVIQLSNQVHTPDQLKAAAKEFEEALKL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LLNTANEKVGNNYIFSGNALTTKPFDENTLTYNGGNAEFEILIDEGYKSPVILNGGNIFD HHHHHHHHCCCCEEEECCEEEECCCCCCCEEECCCCEEEEEEEECCCCCCEEEECCCEEC GIGGIGETYTVYEIEITGFDDTPDNDDTGFRVDSIEIRGDNLDEIIQKLKENFGDSMNIY CCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEE LYEKSDGTPIIRLEANRDFTVTNINNTNPREIDTNSLLINRWNATRNIFETIKFIADELS EEECCCCCEEEEEECCCCEEEEECCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHC EGRLLFSGPLISEDSNDYFSNNRPDYQVISKPFNKSTEVKLMEQSVERIINFRAKIGSIL CCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KELRNEQNYQEDRKLVLEKQKSEAEDADLAKSISEYERYRLAYDAIMKLFVNHKNMSILD HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2193164; 11677609 [H]