Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is yhfA [C]

Identifier: 15606666

GI number: 15606666

Start: 1077544

End: 1077960

Strand: Direct

Name: yhfA [C]

Synonym: aq_1515

Alternate gene names: 15606666

Gene position: 1077544-1077960 (Clockwise)

Preceding gene: 15606665

Following gene: 15606667

Centisome position: 69.46

GC content: 44.6

Gene sequence:

>417_bases
ATGAAGGTTAAAGTCAAGCAAAAGGAAGACTTTCACTTCATCGGTGTTGGACCTGCGGGCAGAGAAGTGCCTATAGACGC
CGCGGATTACGTTGGAGGGAAAGGAAGAGGTATAAGACCCCCAGAACTTCTCTTCCACTCAGTAGCGGGATGCGTAGGAA
TACACCTGTATGAGGCACTCCATAAGGAAGGAAAACACGTTGAAGACATAGAGATAGAAACGGATGCGGAAAGAATTACC
GACAGGTATCCCAAAGTGTTCACCAAAATCTACCTTTTCGTGAAGGTAAAAGGTGATGTTTCAGAAGAAGAGGTGAAAAA
TGCTCTTGATAAGGTAATCTACAACCCCGGCACTTGTTCCATAGCTTACATGGTTAACCAAGTAGCTCCCATAGAGTACA
AAGTTGAGATCCTGTAA

Upstream 100 bases:

>100_bases
CAGAAACAGGGAATAGAAGCTAAAGCAGTAGGCACGATGGAGTTCGCCGAAGAAATTTCCAAGAGGATTGAGTAATTATT
CCCTAACAAGGAGGTCATAA

Downstream 100 bases:

>100_bases
GGAGGTGCTCGTGTCTTTCTTTCGGACTCTTTTTGTTTTATAAGCTCGGAGACCTGAGATGGTAACAGAAGTAAAGAAAA
AGCTTTCTAAAGAGGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: OsmC/Ohr Family Protein; OsmC-Like Protein; Redox Protein Regulator OsmC/Ohr Family

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKVKVKQKEDFHFIGVGPAGREVPIDAADYVGGKGRGIRPPELLFHSVAGCVGIHLYEALHKEGKHVEDIEIETDAERIT
DRYPKVFTKIYLFVKVKGDVSEEEVKNALDKVIYNPGTCSIAYMVNQVAPIEYKVEIL

Sequences:

>Translated_138_residues
MKVKVKQKEDFHFIGVGPAGREVPIDAADYVGGKGRGIRPPELLFHSVAGCVGIHLYEALHKEGKHVEDIEIETDAERIT
DRYPKVFTKIYLFVKVKGDVSEEEVKNALDKVIYNPGTCSIAYMVNQVAPIEYKVEIL
>Mature_138_residues
MKVKVKQKEDFHFIGVGPAGREVPIDAADYVGGKGRGIRPPELLFHSVAGCVGIHLYEALHKEGKHVEDIEIETDAERIT
DRYPKVFTKIYLFVKVKGDVSEEEVKNALDKVIYNPGTCSIAYMVNQVAPIEYKVEIL

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15458; Mature: 15458

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKVKQKEDFHFIGVGPAGREVPIDAADYVGGKGRGIRPPELLFHSVAGCVGIHLYEAL
CCEECCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HKEGKHVEDIEIETDAERITDRYPKVFTKIYLFVKVKGDVSEEEVKNALDKVIYNPGTCS
HHCCCCCEEEEECCCHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEE
IAYMVNQVAPIEYKVEIL
HEEHHHCCCCCEEEEEEC
>Mature Secondary Structure
MKVKVKQKEDFHFIGVGPAGREVPIDAADYVGGKGRGIRPPELLFHSVAGCVGIHLYEAL
CCEECCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HKEGKHVEDIEIETDAERITDRYPKVFTKIYLFVKVKGDVSEEEVKNALDKVIYNPGTCS
HHCCCCCEEEEECCCHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEE
IAYMVNQVAPIEYKVEIL
HEEHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA