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The map label for this gene is ybgC [C]

Identifier: 15606651

GI number: 15606651

Start: 1063698

End: 1064084

Strand: Direct

Name: ybgC [C]

Synonym: aq_1494

Alternate gene names: 15606651

Gene position: 1063698-1064084 (Clockwise)

Preceding gene: 15606639

Following gene: 15606655

Centisome position: 68.57

GC content: 39.53

Gene sequence:

>387_bases
ATGCCCTTCATTTACAGGAGGAGAGTCCAGTTCTACGAGACCGACGCTCAAGGGATTGTACACCACTCCAATTACTTTAG
GTACTTTGAAGAGGCAAGGGGTGAATTCCTTCGCTCAAAGGGTTTTCCCTATTCAAAGATGAGGGATATGGGACTGGAAG
TGGTACTTTTGAATGCTTACTGTGAGTATAAAAAGCCCTTGTTTTACGACGATGTATTCGAAGTACACTTGAACCTAGAA
GAACTTTCTCGCTTTACCTTTACCTTTTCCTATATAGTTTTTAAAGAAGACATAGCGGTTGCAAAGGCTAATACAAAACA
CTGCATGGTAAAAAATGGAAAGATAGTCTCAATTCCGAAGGAAGTTCTTGAAGTTTTAAAGGATTAA

Upstream 100 bases:

>100_bases
TTTCCCGTCTAAGTTCGTCTATGTCCGAGGACATCACTCAAAAGAATTTATTTTATTTCTGATCTGTGTCAAGCTGAAGA
AATACCTGTAAAATCAAATT

Downstream 100 bases:

>100_bases
ACCCTCGTGTTTTAATAGTTCACTCTTAATTTCTATACCTTGATTAAAACCACCTAAATCCCTTTTAGAAATAACCCTGT
GGCAAGGTATGATCACAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLE
ELSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPKEVLEVLKD

Sequences:

>Translated_128_residues
MPFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLE
ELSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPKEVLEVLKD
>Mature_127_residues
PFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLEE
LSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPKEVLEVLKD

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1494_AQUAE (O67466)

Other databases:

- EMBL:   AE000657
- PIR:   H70429
- RefSeq:   NP_214031.1
- PDB:   2EGI
- PDB:   2EGJ
- PDB:   2EGR
- PDBsum:   2EGI
- PDBsum:   2EGJ
- PDBsum:   2EGR
- ProteinModelPortal:   O67466
- SMR:   O67466
- GeneID:   1192997
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_1494
- NMPDR:   fig|224324.1.peg.1046
- HOGENOM:   HBG731751
- OMA:   IRTRLEF
- ProtClustDB:   CLSK2299724
- BioCyc:   AAEO224324:AQ_1494-MONOMER
- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- TIGRFAMs:   TIGR00051

Pfam domain/function: PF03061 4HBT

EC number: NA

Molecular weight: Translated: 15286; Mature: 15155

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: ACT_SITE 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAY
CCCHHHHHHHEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEEECH
CEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPK
HCCCCCCCCCCHHHEEECHHHHHHHHHHHHEEEEECCEEEECCCCCEEEEECCEEEECHH
EVLEVLKD
HHHHHHCC
>Mature Secondary Structure 
PFIYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAY
CCHHHHHHHEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEEECH
CEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFKEDIAVAKANTKHCMVKNGKIVSIPK
HCCCCCCCCCCHHHEEECHHHHHHHHHHHHEEEEECCEEEECCCCCEEEEECCEEEECHH
EVLEVLKD
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320