| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is nuoI1
Identifier: 15606521
GI number: 15606521
Start: 932142
End: 932747
Strand: Direct
Name: nuoI1
Synonym: aq_1317
Alternate gene names: 15606521
Gene position: 932142-932747 (Clockwise)
Preceding gene: 15606520
Following gene: 15606522
Centisome position: 60.09
GC content: 46.04
Gene sequence:
>606_bases ATGGGTGTGAAGAAGTTAAGCAGGAAGGATTACTTGAACATACTAGAAAGCATACTTTTTATAGACTTCCTTAAGGGACT TTCCGTAACGCTGAAAAACCTCTTGAGGAGACCAATTACTACGGAATACCCGAAAGAAAAACTCACTCCTCCCAAGCGTT TCAGGGGAGCTCACGGGCACTATGTGTGGGACGGAACCGAACCTGACTCACTCAAAGCTATAGAAAAGTTCATGTCTTAT GAAAAGGCAAAGAGCAGGTGTGTTGCCTGCTACATGTGTCAGACAGCCTGTCCCATGCCAACTCTTTTCAGAATAGAAGC GGTGCAGCTTCCTAATGGGAAGAAAAAGGTCGTAAGGTTTGACATGAACCTCCTTAACTGTCTCTTCTGTGGGCTCTGCG TTGACGCGTGTCCCGTGGGATGTCTTACGATGACGGATATCTTTGAACTCGCAAATTACTCAAGGAGAAATGAAGTCCTT CGCATGGAGGACCTTGAGAAGTTCGCCATAGACTTCAAGCAAAGAAGGGGCAACGAGCCCGACAGAATTTGGCCAAATGA TGAAGAAAGGGAAAAACTGTGGGGGAAGATAGAGTGGAGTGGTTAA
Upstream 100 bases:
>100_bases AGGACATTACGGAAATTGCCTGGAAGATACTCCTTCCCATAGCGATACTTAACGTGATAATTACTGCGGTTGTGGTTTAT GCATTTTAGGAGGATTTAGG
Downstream 100 bases:
>100_bases TCTTCTTCATCTTAGGAGCTTGGCTTATAATTTCTGCCTTGGGGACGGTTCTGGCTAAAAATCCCATTCACGTTATGCTC TTCTTCCTTTCCTCCTTACT
Product: NADH dehydrogenase I chain I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MGVKKLSRKDYLNILESILFIDFLKGLSVTLKNLLRRPITTEYPKEKLTPPKRFRGAHGHYVWDGTEPDSLKAIEKFMSY EKAKSRCVACYMCQTACPMPTLFRIEAVQLPNGKKKVVRFDMNLLNCLFCGLCVDACPVGCLTMTDIFELANYSRRNEVL RMEDLEKFAIDFKQRRGNEPDRIWPNDEEREKLWGKIEWSG
Sequences:
>Translated_201_residues MGVKKLSRKDYLNILESILFIDFLKGLSVTLKNLLRRPITTEYPKEKLTPPKRFRGAHGHYVWDGTEPDSLKAIEKFMSY EKAKSRCVACYMCQTACPMPTLFRIEAVQLPNGKKKVVRFDMNLLNCLFCGLCVDACPVGCLTMTDIFELANYSRRNEVL RMEDLEKFAIDFKQRRGNEPDRIWPNDEEREKLWGKIEWSG >Mature_200_residues GVKKLSRKDYLNILESILFIDFLKGLSVTLKNLLRRPITTEYPKEKLTPPKRFRGAHGHYVWDGTEPDSLKAIEKFMSYE KAKSRCVACYMCQTACPMPTLFRIEAVQLPNGKKKVVRFDMNLLNCLFCGLCVDACPVGCLTMTDIFELANYSRRNEVLR MEDLEKFAIDFKQRRGNEPDRIWPNDEEREKLWGKIEWSG
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI4505371, Length=149, Percent_Identity=29.5302013422819, Blast_Score=86, Evalue=2e-17, Organism=Escherichia coli, GI1788617, Length=126, Percent_Identity=31.7460317460317, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17555194, Length=151, Percent_Identity=29.1390728476821, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI17864306, Length=149, Percent_Identity=28.8590604026846, Blast_Score=88, Evalue=3e-18,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NUOI1_AQUAE (O67337)
Other databases:
- EMBL: AE000657 - PIR: F70413 - RefSeq: NP_213901.1 - ProteinModelPortal: O67337 - SMR: O67337 - GeneID: 1192775 - GenomeReviews: AE000657_GR - KEGG: aae:aq_1317 - NMPDR: fig|224324.1.peg.916 - HOGENOM: HBG724359 - OMA: VEGGDNT - ProtClustDB: CLSK233603 - BioCyc: AAEO224324:AQ_1317-MONOMER - BRENDA: 1.6.99.5 - HAMAP: MF_01351 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR010226 - Gene3D: G3DSA:1.10.1060.10
Pfam domain/function: SSF46548 Helical_ferredxn
EC number: =1.6.99.5
Molecular weight: Translated: 23411; Mature: 23279
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVKKLSRKDYLNILESILFIDFLKGLSVTLKNLLRRPITTEYPKEKLTPPKRFRGAHGH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCC YVWDGTEPDSLKAIEKFMSYEKAKSRCVACYMCQTACPMPTLFRIEAVQLPNGKKKVVRF EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCHHHHHH DMNLLNCLFCGLCVDACPVGCLTMTDIFELANYSRRNEVLRMEDLEKFAIDFKQRRGNEP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DRIWPNDEEREKLWGKIEWSG CCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure GVKKLSRKDYLNILESILFIDFLKGLSVTLKNLLRRPITTEYPKEKLTPPKRFRGAHGH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCC YVWDGTEPDSLKAIEKFMSYEKAKSRCVACYMCQTACPMPTLFRIEAVQLPNGKKKVVRF EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCHHHHHH DMNLLNCLFCGLCVDACPVGCLTMTDIFELANYSRRNEVLRMEDLEKFAIDFKQRRGNEP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DRIWPNDEEREKLWGKIEWSG CCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320