| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is tatC [C]
Identifier: 15606489
GI number: 15606489
Start: 895686
End: 896408
Strand: Direct
Name: tatC [C]
Synonym: aq_1267
Alternate gene names: 15606489
Gene position: 895686-896408 (Clockwise)
Preceding gene: 15606487
Following gene: 15606490
Centisome position: 57.74
GC content: 41.49
Gene sequence:
>723_bases ATGCCTCTAACGGAACATCTGAGAGAGCTTAGGTATCGTTTAATAATATCTATAATTGCCTTCCTTATAGGCTCCGGGAT AGCCTTTTACTTTGCAAAGTACGTGTTTGAAATTTTAAAAGAACCCATCCTGAAGTCCTACCCCGAAGTGGAATTAATAA CTCTATCTCCCACAGAACCTCTCTTTATACTCATAAAGATATCTTTAGCGGTTGGATTTATAATCGCCTCTCCCGTAATA CTTTACCAGTTCTGGCGTTTTATAGAGCCAGCCCTTTACTCCCATGAAAAAAGAGCTTTTATCCCGCTGCTTCTTGGTTC AATACTTCTCTTTATGCTTGGTGCATTGTTTGCCTACTTTATTGTCCTGCCTTTAGCCCTTAAGTTCTTGCTCGGCCTTG GATTTACTCAGCTCCTTGCAACTCCTTACCTTTCAGTTGATATGTACATAAGCTTTGTCCTTAAACTTGTTGTGGCCTTC GGCATAGCTTTTGAGATGCCCATAGTCCTTTACGTTCTACAAAAAGCAGGAGTAATCACCCCCGAGCAGTTAGCGAGTTT CAGAAAGTACTTCATAGTTATAGCCTTCGTGATAGGTGCGATAATCGCTCCGGATGTTTCCACACAGGTTTTGATGGCTA TTCCTCTTCTTCTCCTGTACGAGATATCCATCTTCCTTGGAAAACTGGCTACGAGGAAGAAGAAGGAAATTCAAAAGGCA TAA
Upstream 100 bases:
>100_bases CCCGAGGACATAGCCGAGGAATTAAAGGAGGAGCTAGAAGACGTTTTAGAAGAAGAAAAGGAGGAGAAGAAGGAAGATGA GTCAGGAAAAACTCCCGGAA
Downstream 100 bases:
>100_bases GCTTTTTTTAATATTCTTATTAAATAAGGTTATATATAACAGAGCTCATAATAGGTTTTAATAAATATGTCATGAAAAGA GCCGAGGAGGTACCCGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPLTEHLRELRYRLIISIIAFLIGSGIAFYFAKYVFEILKEPILKSYPEVELITLSPTEPLFILIKISLAVGFIIASPVI LYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFAYFIVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVAF GIAFEMPIVLYVLQKAGVITPEQLASFRKYFIVIAFVIGAIIAPDVSTQVLMAIPLLLLYEISIFLGKLATRKKKEIQKA
Sequences:
>Translated_240_residues MPLTEHLRELRYRLIISIIAFLIGSGIAFYFAKYVFEILKEPILKSYPEVELITLSPTEPLFILIKISLAVGFIIASPVI LYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFAYFIVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVAF GIAFEMPIVLYVLQKAGVITPEQLASFRKYFIVIAFVIGAIIAPDVSTQVLMAIPLLLLYEISIFLGKLATRKKKEIQKA >Mature_239_residues PLTEHLRELRYRLIISIIAFLIGSGIAFYFAKYVFEILKEPILKSYPEVELITLSPTEPLFILIKISLAVGFIIASPVIL YQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFAYFIVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVAFG IAFEMPIVLYVLQKAGVITPEQLASFRKYFIVIAFVIGAIIAPDVSTQVLMAIPLLLLYEISIFLGKLATRKKKEIQKA
Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family
Homologues:
Organism=Escherichia coli, GI2367313, Length=246, Percent_Identity=39.8373983739837, Blast_Score=170, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1267_AQUAE (O67305)
Other databases:
- EMBL: AE000657 - PIR: F70409 - RefSeq: NP_213869.1 - GeneID: 1192743 - GenomeReviews: AE000657_GR - KEGG: aae:aq_1267 - NMPDR: fig|224324.1.peg.884 - HOGENOM: HBG733232 - OMA: TDINNYL - PhylomeDB: O67305 - ProtClustDB: CLSK2299639 - BioCyc: AAEO224324:AQ_1267-MONOMER - InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 - PRINTS: PR01840 - TIGRFAMs: TIGR00945
Pfam domain/function: PF00902 TatC
EC number: NA
Molecular weight: Translated: 27130; Mature: 26998
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd565e38)-; HASH(0xb3c52d4)-; HASH(0xce40b44)-; HASH(0xc38fc64)-; HASH(0xdabe7b4)-; HASH(0xc883610)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTEHLRELRYRLIISIIAFLIGSGIAFYFAKYVFEILKEPILKSYPEVELITLSPTEP CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC LFILIKISLAVGFIIASPVILYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFAYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVAFGIAFEMPIVLYVLQKAGVIT HHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEQLASFRKYFIVIAFVIGAIIAPDVSTQVLMAIPLLLLYEISIFLGKLATRKKKEIQKA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure PLTEHLRELRYRLIISIIAFLIGSGIAFYFAKYVFEILKEPILKSYPEVELITLSPTEP CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC LFILIKISLAVGFIIASPVILYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFAYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVAFGIAFEMPIVLYVLQKAGVIT HHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEQLASFRKYFIVIAFVIGAIIAPDVSTQVLMAIPLLLLYEISIFLGKLATRKKKEIQKA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320