| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15606485
Identifier: 15606485
GI number: 15606485
Start: 890580
End: 892274
Strand: Direct
Name: 15606485
Synonym: aq_1262
Alternate gene names: NA
Gene position: 890580-892274 (Clockwise)
Preceding gene: 15606484
Following gene: 15606486
Centisome position: 57.41
GC content: 44.07
Gene sequence:
>1695_bases ATGAGGAGAATTGGAGCCATAACAGCACTCTCCCTGCCGGTTCTTTTATCACTTTTGTACTCATGCGGAACAGGAGGAAG TGCAAGTAAAGAAGAAATCTTATCTAAAAAGGAACACAACCCCGAGCCCAACATACCTCTTGAATGTTATACGGACACAG GAGTGGTAAAACTCGGAAAGGCGATAGCCAATCCCTGTTATGTGTGCCATACAAAAGCTCTAACTCCCTACGAAAACGAA GTTGACGACTTTGACCTGCAACTCGTTTACGATTTTCCGGAAGAAATAAAAGAAATGGGAAATCCATGGCTCAATGCCAT TAAACCAGAGCTAACCATAGGAAGTGTACCTATGCCTTCCGACGAAGAAATTAAAACGTGGATAAGACAGGACAACTGGA GTAAAGCCTATGCAGAAAAAGGAAAAGGAGAACTCGTTTACTTTCCCGATATACCACCCATATACAAATACGAAAACGGT TCTTACGAACTTATAAACGTTGATAAAGAAGGCTTTGTAAGGGACCCCGAAACGGGTGAGTATACTGGATGGCGTGTGTT TAAGTGGAAACCTTTTCCCGGATTTTTCCCCACAAACGGGAGGATAGACTCAACCTTTATAAGGCTTCCTGAAAAGTTCA GAAAGAAGAACGGAGAGTTTGATTTAAACCTTTACAAAAAGAACCTCGCAATTCTTGAGTGTGCGATGAAAGGCGTAGCT CCCGGAGAAACCTGCTCGGGAACTGAAGTAGGAGACTTTATCATGCCTTTCCGCTACGAAGGTGATGCCTCAGACGTAGA AGTCGTAGTGTACCAGTATCCTCCCGGAACGGAATTTGCACATCCCCTTTACTACCTAGATCCCGAAAACACGCTTTCCT TTAAATCATTGAGGATTAAGGAAATGAGGTATATGAAGAAGCTTGCTTACGCGGATACGAGAACGGGCACGGGAGAAGAA GAGGAGGAAGAGGGCACATTCTTCTGGGATAAGGGCAGATTTTTTAACGACAGCGGATACTGGGAAATGAGGGCATTTAT AGAAGATAAAAATGGATACCTCAGACCCCAGTCTCCCGAAGAGAGCAAGTTCTGCATAGCCTGCCACGGAGGTATAGGCG GAACCGTTGACGGCACATTTACCCTCTGGAGGAAGATTCCCGGAGAGGAAGGCTGGAAGGAACAGGATTACAAAAACATA AAGGATTACAGGTATAAAGCTATTACATGTGAAAATCTGGATAGCCTTGAAATGGGAGAGGAAGTGAAGAAAGCCCTTGA GGCTTACTGTTCCAAAGTGGGCGAATCACCGGGAGAATACACCGTGTACTTTGCACTCACTGCGGGTGGGGACCACTTCA GGAGCAACTATGAAATACTCCAAGATATAAGTGTGGACGGAAAAGTGGATCTGGAACTCCTCTATAATCCCGAGAAGATA AAATTCATTGATAACAGTGGATTTATAAAACCTGAACTCTTCTTCCCTGAGCCAGAAAGAGCCTACGGTATAGACAAGCA GTACTACAGGATAGTTAAAGCACAGGCATTCATTTACGGAAGGGATGTATTTGAGAAGGCGTTTGGCATATCAAGCGGTG GAAATTCCCTGGAAGAATTGGATAATTTAGAAAGTACAGGTGTTAAGGAGTCGGGAATATGGAACTTCGTGAAAAACTTC CTCTCTTCAGAATGA
Upstream 100 bases:
>100_bases ATATTTACAGAGCGGCTATAACTTGGATGTTCTAAAAACCCCTGCGAGGAGGAGCGTGGGGAGGTGGGGCTTCCTTTAGT CTTTTTAGAGAGGTACAAGG
Downstream 100 bases:
>100_bases GCACACTTTTAGCCATTCTTTTCCTCCTCCCTTTTTACACATTTTCTCTGAATAAAAAACCCGAAGAAGTTTTAAAGGGA CTCTACCCTTCCGCGGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MRRIGAITALSLPVLLSLLYSCGTGGSASKEEILSKKEHNPEPNIPLECYTDTGVVKLGKAIANPCYVCHTKALTPYENE VDDFDLQLVYDFPEEIKEMGNPWLNAIKPELTIGSVPMPSDEEIKTWIRQDNWSKAYAEKGKGELVYFPDIPPIYKYENG SYELINVDKEGFVRDPETGEYTGWRVFKWKPFPGFFPTNGRIDSTFIRLPEKFRKKNGEFDLNLYKKNLAILECAMKGVA PGETCSGTEVGDFIMPFRYEGDASDVEVVVYQYPPGTEFAHPLYYLDPENTLSFKSLRIKEMRYMKKLAYADTRTGTGEE EEEEGTFFWDKGRFFNDSGYWEMRAFIEDKNGYLRPQSPEESKFCIACHGGIGGTVDGTFTLWRKIPGEEGWKEQDYKNI KDYRYKAITCENLDSLEMGEEVKKALEAYCSKVGESPGEYTVYFALTAGGDHFRSNYEILQDISVDGKVDLELLYNPEKI KFIDNSGFIKPELFFPEPERAYGIDKQYYRIVKAQAFIYGRDVFEKAFGISSGGNSLEELDNLESTGVKESGIWNFVKNF LSSE
Sequences:
>Translated_564_residues MRRIGAITALSLPVLLSLLYSCGTGGSASKEEILSKKEHNPEPNIPLECYTDTGVVKLGKAIANPCYVCHTKALTPYENE VDDFDLQLVYDFPEEIKEMGNPWLNAIKPELTIGSVPMPSDEEIKTWIRQDNWSKAYAEKGKGELVYFPDIPPIYKYENG SYELINVDKEGFVRDPETGEYTGWRVFKWKPFPGFFPTNGRIDSTFIRLPEKFRKKNGEFDLNLYKKNLAILECAMKGVA PGETCSGTEVGDFIMPFRYEGDASDVEVVVYQYPPGTEFAHPLYYLDPENTLSFKSLRIKEMRYMKKLAYADTRTGTGEE EEEEGTFFWDKGRFFNDSGYWEMRAFIEDKNGYLRPQSPEESKFCIACHGGIGGTVDGTFTLWRKIPGEEGWKEQDYKNI KDYRYKAITCENLDSLEMGEEVKKALEAYCSKVGESPGEYTVYFALTAGGDHFRSNYEILQDISVDGKVDLELLYNPEKI KFIDNSGFIKPELFFPEPERAYGIDKQYYRIVKAQAFIYGRDVFEKAFGISSGGNSLEELDNLESTGVKESGIWNFVKNF LSSE >Mature_564_residues MRRIGAITALSLPVLLSLLYSCGTGGSASKEEILSKKEHNPEPNIPLECYTDTGVVKLGKAIANPCYVCHTKALTPYENE VDDFDLQLVYDFPEEIKEMGNPWLNAIKPELTIGSVPMPSDEEIKTWIRQDNWSKAYAEKGKGELVYFPDIPPIYKYENG SYELINVDKEGFVRDPETGEYTGWRVFKWKPFPGFFPTNGRIDSTFIRLPEKFRKKNGEFDLNLYKKNLAILECAMKGVA PGETCSGTEVGDFIMPFRYEGDASDVEVVVYQYPPGTEFAHPLYYLDPENTLSFKSLRIKEMRYMKKLAYADTRTGTGEE EEEEGTFFWDKGRFFNDSGYWEMRAFIEDKNGYLRPQSPEESKFCIACHGGIGGTVDGTFTLWRKIPGEEGWKEQDYKNI KDYRYKAITCENLDSLEMGEEVKKALEAYCSKVGESPGEYTVYFALTAGGDHFRSNYEILQDISVDGKVDLELLYNPEKI KFIDNSGFIKPELFFPEPERAYGIDKQYYRIVKAQAFIYGRDVFEKAFGISSGGNSLEELDNLESTGVKESGIWNFVKNF LSSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1262_AQUAE (O67301)
Other databases:
- EMBL: AE000657 - PIR: B70409 - RefSeq: NP_213865.1 - GeneID: 1192739 - GenomeReviews: AE000657_GR - KEGG: aae:aq_1262 - NMPDR: fig|224324.1.peg.880 - HOGENOM: HBG616227 - OMA: GDEFRQN - ProtClustDB: CLSK871710 - BioCyc: AAEO224324:AQ_1262-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64331; Mature: 64331
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIGAITALSLPVLLSLLYSCGTGGSASKEEILSKKEHNPEPNIPLECYTDTGVVKLGK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCHHHHHH AIANPCYVCHTKALTPYENEVDDFDLQLVYDFPEEIKEMGNPWLNAIKPELTIGSVPMPS HHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHCCCCEEECCCCCCC DEEIKTWIRQDNWSKAYAEKGKGELVYFPDIPPIYKYENGSYELINVDKEGFVRDPETGE CHHHHHHHHCCCCCHHHHHCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCC YTGWRVFKWKPFPGFFPTNGRIDSTFIRLPEKFRKKNGEFDLNLYKKNLAILECAMKGVA CCCEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHCCCCEEEEEEHHHHHHHHHHHHCCC PGETCSGTEVGDFIMPFRYEGDASDVEVVVYQYPPGTEFAHPLYYLDPENTLSFKSLRIK CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHH EMRYMKKLAYADTRTGTGEEEEEEGTFFWDKGRFFNDSGYWEMRAFIEDKNGYLRPQSPE HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEECCCCCEEEEEEEECCCCCCCCCCCC ESKFCIACHGGIGGTVDGTFTLWRKIPGEEGWKEQDYKNIKDYRYKAITCENLDSLEMGE CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHH EVKKALEAYCSKVGESPGEYTVYFALTAGGDHFRSNYEILQDISVDGKVDLELLYNPEKI HHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHCCHHHHHHCCCCCEEEEEEEECCCEE KFIDNSGFIKPELFFPEPERAYGIDKQYYRIVKAQAFIYGRDVFEKAFGISSGGNSLEEL EEECCCCCCCCEEECCCCHHHCCCCHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCHHHHH DNLESTGVKESGIWNFVKNFLSSE HCHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRRIGAITALSLPVLLSLLYSCGTGGSASKEEILSKKEHNPEPNIPLECYTDTGVVKLGK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCHHHHHH AIANPCYVCHTKALTPYENEVDDFDLQLVYDFPEEIKEMGNPWLNAIKPELTIGSVPMPS HHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHCCCCEEECCCCCCC DEEIKTWIRQDNWSKAYAEKGKGELVYFPDIPPIYKYENGSYELINVDKEGFVRDPETGE CHHHHHHHHCCCCCHHHHHCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCC YTGWRVFKWKPFPGFFPTNGRIDSTFIRLPEKFRKKNGEFDLNLYKKNLAILECAMKGVA CCCEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHCCCCEEEEEEHHHHHHHHHHHHCCC PGETCSGTEVGDFIMPFRYEGDASDVEVVVYQYPPGTEFAHPLYYLDPENTLSFKSLRIK CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHH EMRYMKKLAYADTRTGTGEEEEEEGTFFWDKGRFFNDSGYWEMRAFIEDKNGYLRPQSPE HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEECCCCCEEEEEEEECCCCCCCCCCCC ESKFCIACHGGIGGTVDGTFTLWRKIPGEEGWKEQDYKNIKDYRYKAITCENLDSLEMGE CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHH EVKKALEAYCSKVGESPGEYTVYFALTAGGDHFRSNYEILQDISVDGKVDLELLYNPEKI HHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHCCHHHHHHCCCCCEEEEEEEECCCEE KFIDNSGFIKPELFFPEPERAYGIDKQYYRIVKAQAFIYGRDVFEKAFGISSGGNSLEEL EEECCCCCCCCEEECCCCHHHCCCCHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCHHHHH DNLESTGVKESGIWNFVKNFLSSE HCHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320