| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is forB1 [H]
Identifier: 15606439
GI number: 15606439
Start: 842499
End: 843359
Strand: Direct
Name: forB1 [H]
Synonym: aq_1196
Alternate gene names: 15606439
Gene position: 842499-843359 (Clockwise)
Preceding gene: 15606438
Following gene: 15606440
Centisome position: 54.31
GC content: 46.23
Gene sequence:
>861_bases ATGTCGGTTAAGATATTTAAAATCAACGAAGATTTAAAGGAATTTATGCCTCAAGAAATTGTTGACCTTGAGGAAAAGGC TACTTGGGGCAATCCAAAAAGGGGAGTTATGGACCTCCCCTACGCGAAGGAGCTTATAGAAGAACACTCCCTTTGTGCGG GATGCCCAGAGTCCGCAGCTTTCAGGTACATCCTTGCATCCCTTCCCAGTCCGGAAGACACCGTAATAGTTAACTCTACG GGATGTACCTCTCTCGTTTTTCCGCATATCGCACTCCACACGGTACACCCTCTGTTCGGAAACCAGAATGCTGTTGCTTC GGGTATTAAGAGGGTTCTCGAGTGGAGATTCCCTGACAAGCCTAAGGACGTTGTTGTAATTGCCGGTGACGGTGCTACCA TAGACATCGGACTTGACTGTACACTCCAGTCTTTCTTCAGACAGGAAAAGATAACGACCATATGTTTTGACAATGAAGTT TACGCTAACACCGGTGGACAGGATAGCGGTGCAACACCGAGGGGAATGGAATTCAAGATGGCTCCGGGTGGAAAGCAGTG GGATAAAGTTCCCATGTGGCAACTCGCTATAGACTCCGGATGCCACTACGTTGCAAGGCTTACCGTTTCTTCACCTAAGA AGGTAGAACAAGTAGTAAAGAAAGCTATATACGTCGCAAGAGAAGTAGGACCCACCTACATACACCTCTACACACCGTGC ATACTTGAAATCGGGCTCAACTCAGACCAGGGTCTTTGGGAAATGAGACAAAGGGACAAAGAAAGGTTCAAGTTCTTTGA ATATATGACAGATGAGGCTAAGGAAGTTATTAAGAAGAAGAAAGAGGAGGGTCTGTTATGA
Upstream 100 bases:
>100_bases ATACCCATATTTGGAACCCCCAGAGTTGGTGGTGGTATGACGATGCCTCCTGAATTCATCGTTCAAGAGGTTTTAAGACT TATAGGAAAGGAGGTGAAAC
Downstream 100 bases:
>100_bases CACAACCCGTTAGAAGAAGGATTAACGTTAGAATGCCCGCTATCGGTGGGCAGGGTGCGGTTTCCGCCGCCCACATTATG GCTACCGCTGCGGACCACGC
Product: ferredoxin oxidoreductase beta subunit
Products: NA
Alternate protein names: Pyruvate oxidoreductase beta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSVKIFKINEDLKEFMPQEIVDLEEKATWGNPKRGVMDLPYAKELIEEHSLCAGCPESAAFRYILASLPSPEDTVIVNST GCTSLVFPHIALHTVHPLFGNQNAVASGIKRVLEWRFPDKPKDVVVIAGDGATIDIGLDCTLQSFFRQEKITTICFDNEV YANTGGQDSGATPRGMEFKMAPGGKQWDKVPMWQLAIDSGCHYVARLTVSSPKKVEQVVKKAIYVAREVGPTYIHLYTPC ILEIGLNSDQGLWEMRQRDKERFKFFEYMTDEAKEVIKKKKEEGLL
Sequences:
>Translated_286_residues MSVKIFKINEDLKEFMPQEIVDLEEKATWGNPKRGVMDLPYAKELIEEHSLCAGCPESAAFRYILASLPSPEDTVIVNST GCTSLVFPHIALHTVHPLFGNQNAVASGIKRVLEWRFPDKPKDVVVIAGDGATIDIGLDCTLQSFFRQEKITTICFDNEV YANTGGQDSGATPRGMEFKMAPGGKQWDKVPMWQLAIDSGCHYVARLTVSSPKKVEQVVKKAIYVAREVGPTYIHLYTPC ILEIGLNSDQGLWEMRQRDKERFKFFEYMTDEAKEVIKKKKEEGLL >Mature_285_residues SVKIFKINEDLKEFMPQEIVDLEEKATWGNPKRGVMDLPYAKELIEEHSLCAGCPESAAFRYILASLPSPEDTVIVNSTG CTSLVFPHIALHTVHPLFGNQNAVASGIKRVLEWRFPDKPKDVVVIAGDGATIDIGLDCTLQSFFRQEKITTICFDNEVY ANTGGQDSGATPRGMEFKMAPGGKQWDKVPMWQLAIDSGCHYVARLTVSSPKKVEQVVKKAIYVAREVGPTYIHLYTPCI LEIGLNSDQGLWEMRQRDKERFKFFEYMTDEAKEVIKKKKEEGLL
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 32179; Mature: 32048
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKIFKINEDLKEFMPQEIVDLEEKATWGNPKRGVMDLPYAKELIEEHSLCAGCPESAA CCEEEEEECHHHHHHCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHCCCCHHHH FRYILASLPSPEDTVIVNSTGCTSLVFPHIALHTVHPLFGNQNAVASGIKRVLEWRFPDK HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC PKDVVVIAGDGATIDIGLDCTLQSFFRQEKITTICFDNEVYANTGGQDSGATPRGMEFKM CCCEEEEECCCCEEEEECCHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCCCCCCEEEE APGGKQWDKVPMWQLAIDSGCHYVARLTVSSPKKVEQVVKKAIYVAREVGPTYIHLYTPC CCCCCCCCCCCHHEEEHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCE ILEIGLNSDQGLWEMRQRDKERFKFFEYMTDEAKEVIKKKKEEGLL EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVKIFKINEDLKEFMPQEIVDLEEKATWGNPKRGVMDLPYAKELIEEHSLCAGCPESAA CEEEEEECHHHHHHCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHCCCCHHHH FRYILASLPSPEDTVIVNSTGCTSLVFPHIALHTVHPLFGNQNAVASGIKRVLEWRFPDK HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC PKDVVVIAGDGATIDIGLDCTLQSFFRQEKITTICFDNEVYANTGGQDSGATPRGMEFKM CCCEEEEECCCCEEEEECCHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCCCCCCEEEE APGGKQWDKVPMWQLAIDSGCHYVARLTVSSPKKVEQVVKKAIYVAREVGPTYIHLYTPC CCCCCCCCCCCHHEEEHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCE ILEIGLNSDQGLWEMRQRDKERFKFFEYMTDEAKEVIKKKKEEGLL EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]