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The map label for this gene is rsmI [H]

Identifier: 15606379

GI number: 15606379

Start: 776595

End: 777260

Strand: Direct

Name: rsmI [H]

Synonym: aq_1111

Alternate gene names: 15606379

Gene position: 776595-777260 (Clockwise)

Preceding gene: 15606377

Following gene: 15606380

Centisome position: 50.06

GC content: 43.99

Gene sequence:

>666_bases
ATGCCAAAACTCTACGTCATCCCAACACCCATAGGGAACTTAAAAGACATAACACTAAGAGCCTTGGAAGTGCTAAAGGA
AGTAAATTACATAGCCTGTGAGGACACAAGGAGGACGATGATACTCCTGAATCACTACGGTATAAAGGGAAAAAAGTTAA
TCTCCTATTACGAACCGAAGGAAGAAAAACAAATCCCTAAGATTTTAAAGGTCCTTGAAAAGGAAGACGTGGCTCTCGTT
ACGGACGCCGGTATGCCTGCCATATCGGACCCCGGCTACAGACTGATAAGAAAGTGTATAGAGAAAGGTATAGAGATAGA
GGTCCTTCCGGGGCCAAGTGCAGTTATTACCGCACTCGTGGGCTCGGGTCTTCCCCCAGACAGGTTTCTCTTCGTGGGTT
TCCCTCCCAAAAAGGGCACTAAGGGATTCTTTGAGGAATTGAAGAGCTGTGAGGACACTACCGTTATTCTCTTTGAGAAC
CCGAACAGATTACTTAAAACCTTGAAGATTATTCACGAAGTTTTTGGTAACGTTCAGGCTTGCGTTGCAAGGGAGCTCAC
AAAACTCCACGAAGAATACATAAGGGGAAACTTAGAGGAAATAATTCAGGAACTCGAAAGCAGGGAAAAGATTAAAGGGG
AGGTTGTAGTACTTTTCAGGATTTAA

Upstream 100 bases:

>100_bases
ACTCCCTCTACTTCTGCCCTTTTACCCGAGCAGGAGAGTAAAAGCAAAGTAAAAAAAGCTAAGATTAACCCTACCATCTA
AGTTTTATAATATTTCCCGC

Downstream 100 bases:

>100_bases
ATTTTTGTATATGTTCAGAATTATCATTCTAATTTTTCTGATTTTTACCGTTTCGTGTGAGAAAAGAGAAGAGATAAATA
TAGCGGTTTTCATTTCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MPKLYVIPTPIGNLKDITLRALEVLKEVNYIACEDTRRTMILLNHYGIKGKKLISYYEPKEEKQIPKILKVLEKEDVALV
TDAGMPAISDPGYRLIRKCIEKGIEIEVLPGPSAVITALVGSGLPPDRFLFVGFPPKKGTKGFFEELKSCEDTTVILFEN
PNRLLKTLKIIHEVFGNVQACVARELTKLHEEYIRGNLEEIIQELESREKIKGEVVVLFRI

Sequences:

>Translated_221_residues
MPKLYVIPTPIGNLKDITLRALEVLKEVNYIACEDTRRTMILLNHYGIKGKKLISYYEPKEEKQIPKILKVLEKEDVALV
TDAGMPAISDPGYRLIRKCIEKGIEIEVLPGPSAVITALVGSGLPPDRFLFVGFPPKKGTKGFFEELKSCEDTTVILFEN
PNRLLKTLKIIHEVFGNVQACVARELTKLHEEYIRGNLEEIIQELESREKIKGEVVVLFRI
>Mature_220_residues
PKLYVIPTPIGNLKDITLRALEVLKEVNYIACEDTRRTMILLNHYGIKGKKLISYYEPKEEKQIPKILKVLEKEDVALVT
DAGMPAISDPGYRLIRKCIEKGIEIEVLPGPSAVITALVGSGLPPDRFLFVGFPPKKGTKGFFEELKSCEDTTVILFENP
NRLLKTLKIIHEVFGNVQACVARELTKLHEEYIRGNLEEIIQELESREKIKGEVVVLFRI

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=221, Percent_Identity=46.1538461538462, Blast_Score=177, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25030; Mature: 24899

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLYVIPTPIGNLKDITLRALEVLKEVNYIACEDTRRTMILLNHYGIKGKKLISYYEPK
CCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHCCCC
EEKQIPKILKVLEKEDVALVTDAGMPAISDPGYRLIRKCIEKGIEIEVLPGPSAVITALV
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH
GSGLPPDRFLFVGFPPKKGTKGFFEELKSCEDTTVILFENPNRLLKTLKIIHEVFGNVQA
HCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHH
CVARELTKLHEEYIRGNLEEIIQELESREKIKGEVVVLFRI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure 
PKLYVIPTPIGNLKDITLRALEVLKEVNYIACEDTRRTMILLNHYGIKGKKLISYYEPK
CEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHCCCC
EEKQIPKILKVLEKEDVALVTDAGMPAISDPGYRLIRKCIEKGIEIEVLPGPSAVITALV
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH
GSGLPPDRFLFVGFPPKKGTKGFFEELKSCEDTTVILFENPNRLLKTLKIIHEVFGNVQA
HCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHH
CVARELTKLHEEYIRGNLEEIIQELESREKIKGEVVVLFRI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA