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The map label for this gene is 15606373

Identifier: 15606373

GI number: 15606373

Start: 770996

End: 772048

Strand: Direct

Name: 15606373

Synonym: aq_1104

Alternate gene names: NA

Gene position: 770996-772048 (Clockwise)

Preceding gene: 15606368

Following gene: 15606374

Centisome position: 49.7

GC content: 42.07

Gene sequence:

>1053_bases
GTGGAAACCACAATATTCCAGTTCCAGAAAACTTTTTTCACAAAACCTCCGAAGGAGAGGGTCTTCGTCCTTCATGGAGA
AGAGCAGTATCTCATAAGAACCTTTTTGTCTAAGCTGAAGGAAAAGTACGGGGAGAATTACACGGTTCTGTGGGGGGATG
AGATAAGCGAGGAGGAATTCTACACTGCCCTTTCCGAGACCAGTATATTCGGCGGTTCAAAGGAAAAAGCGGTGGTCATT
TACAACTTCGGGGATTTCCTGAAGAAGCTCGGAAGGAAGAAAAAGGAAAAAGAAAGGCTTATAAAAGTCCTCAGAAACGT
AAAGAGTAACTACGTATTTATAGTGTACGATGCGAAACTCCAGAAACAGGAACTTTCTTCGGAACCTCTGAAATCCGTAG
CGTCTTTCGGCGGTATAGTGGTAGCAAACAGGCTGAGCAAGGAGAGGATAAAACAGCTCGTCCTTAAGAAGTTCAAAGAA
AAAGGGATAAACGTAGAAAACGATGCCCTTGAATACCTTCTCCAGCTCACGGGTTACAACTTGATGGAGCTCAAACTTGA
GGTTGAAAAACTGATAGATTACGCAAGTGAAAAGAAAATTTTAACACTCGATGAGGTAAAGAGAGTAGCCTTCTCAGTCT
CAGAAAACGTAAACGTATTTGAGTTCGTTGATTTACTCCTCTTAAAAGATTACGAAAAGGCTCTTAAAGTTTTGGACTCC
CTCATTTCCTTCGGAATACACCCCCTCCAGATTATGAAAATCCTGTCCTCCTATGCTCTAAAACTTTACACCCTCAAGAG
GCTTGAAGAGAAGGGAGAGGACCTGAATAAGGCGATGGAAAGCGTGGGAATAAAGAACAACTTTCTCAAGATGAAGTTCA
AATCTTACTTAAAGGCAAACTCTAAAGAGGACTTGAAGAACCTAATCCTCTCCCTCCAGAGGATAGACGCTTTTTCTAAA
CTTTACTTTCAGGACACAGTGCAGTTGCTGAGGGATTTCTTGACCTCAAGACTGGAGAGGGAAGTTGTGAAAAATACTTC
TCATGGTGGATAA

Upstream 100 bases:

>100_bases
AACCCTTAAACCTGTCCGATATCTTGAAGATTTCCTTAAGGTCAAGAGTAAACATGGCTTTTACCTCTTTGTAGAGTTAA
GTATTAAATTTAATTTAACT

Downstream 100 bases:

>100_bases
TCTTTTTTATGAAGTTTGCGGTTTGCGTTTTTCCCGGTTCTAACTGCGATTACGACACCTACTACGTTATAAGGGACATT
CTTGAAAAGGACGTGGAATT

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
METTIFQFQKTFFTKPPKERVFVLHGEEQYLIRTFLSKLKEKYGENYTVLWGDEISEEEFYTALSETSIFGGSKEKAVVI
YNFGDFLKKLGRKKKEKERLIKVLRNVKSNYVFIVYDAKLQKQELSSEPLKSVASFGGIVVANRLSKERIKQLVLKKFKE
KGINVENDALEYLLQLTGYNLMELKLEVEKLIDYASEKKILTLDEVKRVAFSVSENVNVFEFVDLLLLKDYEKALKVLDS
LISFGIHPLQIMKILSSYALKLYTLKRLEEKGEDLNKAMESVGIKNNFLKMKFKSYLKANSKEDLKNLILSLQRIDAFSK
LYFQDTVQLLRDFLTSRLEREVVKNTSHGG

Sequences:

>Translated_350_residues
METTIFQFQKTFFTKPPKERVFVLHGEEQYLIRTFLSKLKEKYGENYTVLWGDEISEEEFYTALSETSIFGGSKEKAVVI
YNFGDFLKKLGRKKKEKERLIKVLRNVKSNYVFIVYDAKLQKQELSSEPLKSVASFGGIVVANRLSKERIKQLVLKKFKE
KGINVENDALEYLLQLTGYNLMELKLEVEKLIDYASEKKILTLDEVKRVAFSVSENVNVFEFVDLLLLKDYEKALKVLDS
LISFGIHPLQIMKILSSYALKLYTLKRLEEKGEDLNKAMESVGIKNNFLKMKFKSYLKANSKEDLKNLILSLQRIDAFSK
LYFQDTVQLLRDFLTSRLEREVVKNTSHGG
>Mature_350_residues
METTIFQFQKTFFTKPPKERVFVLHGEEQYLIRTFLSKLKEKYGENYTVLWGDEISEEEFYTALSETSIFGGSKEKAVVI
YNFGDFLKKLGRKKKEKERLIKVLRNVKSNYVFIVYDAKLQKQELSSEPLKSVASFGGIVVANRLSKERIKQLVLKKFKE
KGINVENDALEYLLQLTGYNLMELKLEVEKLIDYASEKKILTLDEVKRVAFSVSENVNVFEFVDLLLLKDYEKALKVLDS
LISFGIHPLQIMKILSSYALKLYTLKRLEEKGEDLNKAMESVGIKNNFLKMKFKSYLKANSKEDLKNLILSLQRIDAFSK
LYFQDTVQLLRDFLTSRLEREVVKNTSHGG

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP189

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1104_AQUAE (O67189)

Other databases:

- EMBL:   AE000657
- PIR:   B70395
- RefSeq:   NP_213752.1
- ProteinModelPortal:   O67189
- GeneID:   1193823
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_1104
- NMPDR:   fig|224324.1.peg.767
- OMA:   FEIQSLI
- ProtClustDB:   CLSK2299597
- BioCyc:   AAEO224324:AQ_1104-MONOMER
- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790
- TIGRFAMs:   TIGR01128

Pfam domain/function: PF06144 DNA_pol3_delta; SSF48019 Pol_clamp_load_C

EC number: 2.7.7.7

Molecular weight: Translated: 40694; Mature: 40694

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTIFQFQKTFFTKPPKERVFVLHGEEQYLIRTFLSKLKEKYGENYTVLWGDEISEEEF
CCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
YTALSETSIFGGSKEKAVVIYNFGDFLKKLGRKKKEKERLIKVLRNVKSNYVFIVYDAKL
HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCHH
QKQELSSEPLKSVASFGGIVVANRLSKERIKQLVLKKFKEKGINVENDALEYLLQLTGYN
HHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
LMELKLEVEKLIDYASEKKILTLDEVKRVAFSVSENVNVFEFVDLLLLKDYEKALKVLDS
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LISFGIHPLQIMKILSSYALKLYTLKRLEEKGEDLNKAMESVGIKNNFLKMKFKSYLKAN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHCCC
SKEDLKNLILSLQRIDAFSKLYFQDTVQLLRDFLTSRLEREVVKNTSHGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METTIFQFQKTFFTKPPKERVFVLHGEEQYLIRTFLSKLKEKYGENYTVLWGDEISEEEF
CCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
YTALSETSIFGGSKEKAVVIYNFGDFLKKLGRKKKEKERLIKVLRNVKSNYVFIVYDAKL
HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCHH
QKQELSSEPLKSVASFGGIVVANRLSKERIKQLVLKKFKEKGINVENDALEYLLQLTGYN
HHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
LMELKLEVEKLIDYASEKKILTLDEVKRVAFSVSENVNVFEFVDLLLLKDYEKALKVLDS
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LISFGIHPLQIMKILSSYALKLYTLKRLEEKGEDLNKAMESVGIKNNFLKMKFKSYLKAN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHCCC
SKEDLKNLILSLQRIDAFSKLYFQDTVQLLRDFLTSRLEREVVKNTSHGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320