Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is 15606289

Identifier: 15606289

GI number: 15606289

Start: 675750

End: 676754

Strand: Direct

Name: 15606289

Synonym: aq_977

Alternate gene names: NA

Gene position: 675750-676754 (Clockwise)

Preceding gene: 15606288

Following gene: 15606290

Centisome position: 43.56

GC content: 43.98

Gene sequence:

>1005_bases
ATGCCTTTGTGGGGAAGGTTCAGAATATCTTTCGACAGCTGGAAGATGATGTCACTCGATAACCATGTCCTTGAAGAGTC
ATCCGAGATAGGCGAAGTAAACGTAGAAACGAGTGAATGGAAACCTATAAATGGATGTATTCCTGAGGATTATGACGAAG
AAAATTTAAAGATTGCATTTATAGACGGTGTAAGAAGAACGGAAAACATCGTTTACCTTGAAGATCCAAACAGTGCAAGC
GTTGTGGAAGGTGCCTTTGTTTCCATAGGCGCCGGTGCGATGGTTTTGTCCTACGGAAAGGTGAATTCCTTGGAAGACTC
ATTAAAAAAATCCGTCGTGAAAAGGTACTTCCTTTTAAGGGACAACGTGGACATCTCTCAACCCACTATCGTGTTCTTAA
CACAAACGGGAAAGCTTGAATTTAAGGTTGACAGGGCTAAAAAGGAACTCTCACCTTACGTCAACGAACTTATGGCTAAT
TTAGAACTCTGGGTAGCACAGCAGGTGTACAAGGCAAAAATGGCGGATTTGATGATAACCGACGGAACGCTCCACTACGT
CGCAAAAGCCAAGAACCTTCCCTTTATAGGATACGTGAAGAAACACAGAAAGATTTACCTCTATCCTGAGCACATAAAGG
TTTTACAAGAGCTCAAGGTCGGACAGAGAACTCCCATAATTCTCATACACTCCCAGCCTACCATGGACTCCCAAAACAAG
AGCTTTGACAAGTACACGTGGTACGTGAAGTTAAACGAAAACGAGGGAATTACGAGCGTGGCCAGACTGGAAGTTCCCGC
AGAACTCGGTTTAGAGGAAGCGGTAAAGCTTGCGAACTTAACAGCTTACTTGATGCCCAAATTCGCCTCTGCTGAGTTCA
ACGACAAGAGAGCACCTCAGAACTTAATCCCCATAAAGTACTTAGAAAATTACCTGAGGAGGAGACTCGGAAGCCAGTCC
TTAATAAGGAGACTCATAGCCCAGAGGATTATGGAGAGAGTATGA

Upstream 100 bases:

>100_bases
AAGAAAAGTAAGCGTGGAGTAATATTCCCTTCTCCTTTCCCTTCTTTTCACCTCAAAAATAAAAATTTTTCTCCTAAATT
AATTCATAGGAGGAATTTAT

Downstream 100 bases:

>100_bases
AGAGGGTTTTAGTAAGCAGGTGTCTCCTTGAGTGTTGCTACCGCTACGATGCAAAAGACGTAAGGGTGGAAAACATAAAG
GAATTACTCAAAAATTACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MPLWGRFRISFDSWKMMSLDNHVLEESSEIGEVNVETSEWKPINGCIPEDYDEENLKIAFIDGVRRTENIVYLEDPNSAS
VVEGAFVSIGAGAMVLSYGKVNSLEDSLKKSVVKRYFLLRDNVDISQPTIVFLTQTGKLEFKVDRAKKELSPYVNELMAN
LELWVAQQVYKAKMADLMITDGTLHYVAKAKNLPFIGYVKKHRKIYLYPEHIKVLQELKVGQRTPIILIHSQPTMDSQNK
SFDKYTWYVKLNENEGITSVARLEVPAELGLEEAVKLANLTAYLMPKFASAEFNDKRAPQNLIPIKYLENYLRRRLGSQS
LIRRLIAQRIMERV

Sequences:

>Translated_334_residues
MPLWGRFRISFDSWKMMSLDNHVLEESSEIGEVNVETSEWKPINGCIPEDYDEENLKIAFIDGVRRTENIVYLEDPNSAS
VVEGAFVSIGAGAMVLSYGKVNSLEDSLKKSVVKRYFLLRDNVDISQPTIVFLTQTGKLEFKVDRAKKELSPYVNELMAN
LELWVAQQVYKAKMADLMITDGTLHYVAKAKNLPFIGYVKKHRKIYLYPEHIKVLQELKVGQRTPIILIHSQPTMDSQNK
SFDKYTWYVKLNENEGITSVARLEVPAELGLEEAVKLANLTAYLMPKFASAEFNDKRAPQNLIPIKYLENYLRRRLGSQS
LIRRLIAQRIMERV
>Mature_333_residues
PLWGRFRISFDSWKMMSLDNHVLEESSEIGEVNVETSEWKPINGCIPEDYDEENLKIAFIDGVRRTENIVYLEDPNSASV
VEGAFVSIGAGAMVLSYGKVNSLEDSLKKSVVKRYFLLRDNVDISQPTIVFLTQTGKLEFKVDRAKKELSPYVNELMANL
ELWVAQQVYKAKMADLMITDGTLHYVAKAKNLPFIGYVKKHRKIYLYPEHIKVLQELKVGQRTPIILIHSQPTMDSQNKS
FDKYTWYVKLNENEGITSVARLEVPAELGLEEAVKLANLTAYLMPKFASAEFNDKRAPQNLIPIKYLENYLRRRLGSQSL
IRRLIAQRIMERV

Specific function: Unknown

COG id: COG2380

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38384; Mature: 38253

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLWGRFRISFDSWKMMSLDNHVLEESSEIGEVNVETSEWKPINGCIPEDYDEENLKIAF
CCCCEEEEEEECCEEEECCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEE
IDGVRRTENIVYLEDPNSASVVEGAFVSIGAGAMVLSYGKVNSLEDSLKKSVVKRYFLLR
ECCCCCCCCEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHC
DNVDISQPTIVFLTQTGKLEFKVDRAKKELSPYVNELMANLELWVAQQVYKAKMADLMIT
CCCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
DGTLHYVAKAKNLPFIGYVKKHRKIYLYPEHIKVLQELKVGQRTPIILIHSQPTMDSQNK
CCCEEEEEHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
SFDKYTWYVKLNENEGITSVARLEVPAELGLEEAVKLANLTAYLMPKFASAEFNDKRAPQ
CCCEEEEEEEECCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NLIPIKYLENYLRRRLGSQSLIRRLIAQRIMERV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLWGRFRISFDSWKMMSLDNHVLEESSEIGEVNVETSEWKPINGCIPEDYDEENLKIAF
CCCEEEEEEECCEEEECCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEE
IDGVRRTENIVYLEDPNSASVVEGAFVSIGAGAMVLSYGKVNSLEDSLKKSVVKRYFLLR
ECCCCCCCCEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHC
DNVDISQPTIVFLTQTGKLEFKVDRAKKELSPYVNELMANLELWVAQQVYKAKMADLMIT
CCCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
DGTLHYVAKAKNLPFIGYVKKHRKIYLYPEHIKVLQELKVGQRTPIILIHSQPTMDSQNK
CCCEEEEEHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
SFDKYTWYVKLNENEGITSVARLEVPAELGLEEAVKLANLTAYLMPKFASAEFNDKRAPQ
CCCEEEEEEEECCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NLIPIKYLENYLRRRLGSQSLIRRLIAQRIMERV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA