Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is 15606255

Identifier: 15606255

GI number: 15606255

Start: 641141

End: 641731

Strand: Direct

Name: 15606255

Synonym: aq_928

Alternate gene names: NA

Gene position: 641141-641731 (Clockwise)

Preceding gene: 15606254

Following gene: 15606256

Centisome position: 41.33

GC content: 39.42

Gene sequence:

>591_bases
ATGGAATTCGTAGTAAAGGAAACGGACGGAGATACTCTATACAAGTTAGTACTCGGACTAGTTGTTCCAAGACCTATAGG
ATGGGTTTCCACGATCAGCAAGGACGGAATACTGAATATAGCTCCTTTTAGTTTCTTCAACGTCGTAAACGACGAACCGC
CCGTTTTAATGATATCGGTGAGCAACAGGGACGACAACACTTTAAAAGACACAGTAAAGAACGTACTTGACACAAAAGAA
TTCGTTGTAAACATGGTGAGCGAAGAAGTATTTGAGAAAATGCTGATCACGGGAGAGGAATTTCCGCCCGAAGTAAACGA
GTTTGAAAAGGCAGGCTTAACACCAGAAACTTCAAAATTCGTAAAAGCTCCAAGAATTAAAGAAGCAAAAGTCTCTTTTG
AGTGCAAACTTTATAAGTACGTCCCCGTTTACGATATGCACGTGATATTTGGGGAAGCTCTTTTAATAAAAGTAGAAGAT
ACAATTCTCGACGAAAACTTAAACGTCAATTATGAAAAGTACAGACCAATAGGAAGGCTCGGGGGGAAGTACTATGTTAA
AGCTTTTGGAGAATGTAAGTTGAAGGTATAA

Upstream 100 bases:

>100_bases
ACCTCAAAACTGTTTGAAACTCAAGGAACTTCTCGGGTTGCTAACAGTTAACTAATTTCTTAATAATACTTGAAGGTAGG
AACGGTTAAACTAATTTTCC

Downstream 100 bases:

>100_bases
TAAGCCGTATTATGGCAGCGGCACCGGTAGAGGGAAATGGGGCAGGATTAGACGTCCATACTTTATTTTTGCACTTAGCT
ATACTCCTATTTTCCGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MEFVVKETDGDTLYKLVLGLVVPRPIGWVSTISKDGILNIAPFSFFNVVNDEPPVLMISVSNRDDNTLKDTVKNVLDTKE
FVVNMVSEEVFEKMLITGEEFPPEVNEFEKAGLTPETSKFVKAPRIKEAKVSFECKLYKYVPVYDMHVIFGEALLIKVED
TILDENLNVNYEKYRPIGRLGGKYYVKAFGECKLKV

Sequences:

>Translated_196_residues
MEFVVKETDGDTLYKLVLGLVVPRPIGWVSTISKDGILNIAPFSFFNVVNDEPPVLMISVSNRDDNTLKDTVKNVLDTKE
FVVNMVSEEVFEKMLITGEEFPPEVNEFEKAGLTPETSKFVKAPRIKEAKVSFECKLYKYVPVYDMHVIFGEALLIKVED
TILDENLNVNYEKYRPIGRLGGKYYVKAFGECKLKV
>Mature_196_residues
MEFVVKETDGDTLYKLVLGLVVPRPIGWVSTISKDGILNIAPFSFFNVVNDEPPVLMISVSNRDDNTLKDTVKNVLDTKE
FVVNMVSEEVFEKMLITGEEFPPEVNEFEKAGLTPETSKFVKAPRIKEAKVSFECKLYKYVPVYDMHVIFGEALLIKVED
TILDENLNVNYEKYRPIGRLGGKYYVKAFGECKLKV

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y928_AQUAE (O67071)

Other databases:

- EMBL:   AE000657
- PIR:   D70380
- RefSeq:   NP_213633.1
- ProteinModelPortal:   O67071
- SMR:   O67071
- GeneID:   1193613
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_928
- NMPDR:   fig|224324.1.peg.648
- HOGENOM:   HBG644901
- OMA:   HRCGERF
- BioCyc:   AAEO224324:AQ_928-MONOMER
- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002
- Gene3D:   G3DSA:2.30.110.10
- SMART:   SM00903

Pfam domain/function: PF01613 Flavin_Reduct; SSF50475 FMN_binding

EC number: NA

Molecular weight: Translated: 22299; Mature: 22299

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFVVKETDGDTLYKLVLGLVVPRPIGWVSTISKDGILNIAPFSFFNVVNDEPPVLMISV
CCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCHHHHHHCCCCCCEEEEEE
SNRDDNTLKDTVKNVLDTKEFVVNMVSEEVFEKMLITGEEFPPEVNEFEKAGLTPETSKF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHH
VKAPRIKEAKVSFECKLYKYVPVYDMHVIFGEALLIKVEDTILDENLNVNYEKYRPIGRL
HCCCCCCCCEEEEEEEEEEECCEEEHHEEECCEEEEEEEHHEECCCCCCCHHHHCCHHHC
GGKYYVKAFGECKLKV
CCEEEEEEECEEEECC
>Mature Secondary Structure
MEFVVKETDGDTLYKLVLGLVVPRPIGWVSTISKDGILNIAPFSFFNVVNDEPPVLMISV
CCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCHHHHHHCCCCCCEEEEEE
SNRDDNTLKDTVKNVLDTKEFVVNMVSEEVFEKMLITGEEFPPEVNEFEKAGLTPETSKF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHH
VKAPRIKEAKVSFECKLYKYVPVYDMHVIFGEALLIKVEDTILDENLNVNYEKYRPIGRL
HCCCCCCCCEEEEEEEEEEECCEEEHHEEECCEEEEEEEHHEECCCCCCCHHHHCCHHHC
GGKYYVKAFGECKLKV
CCEEEEEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320